Information for 13-CARCACCWTGGAC (Motif 29)

A G T C C G T A C T A G A G T C C G T A A G T C A G T C C G A T A C G T A C T G A C T G G T C A A G T C
Reverse Opposite:
A C T G A C G T A G T C A G T C C G T A C G T A C T A G A C T G A C G T A C T G A G T C A C G T A C T G
p-value:1e-7
log p-value:-1.799e+01
Information Content per bp:1.918
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif5.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.4 +/- 30.3bp
Average Position of motif in Background43.3 +/- 24.7bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:1
Score:0.79
Offset:-1
Orientation:reverse strand
Alignment:-CARCACCWTGGAC------
TCAGCACCATGGACAGCTCC
 A C G T A G T C C G T A C T A G A G T C C G T A A G T C A G T C C G A T A C G T A C T G A C T G G T C A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A G C T G A T C C T G A T C A G T A G C C T G A A T G C G A T C G C T A G A C T C T A G C T A G G T C A A T G C C G T A T C A G G T A C C A G T T A G C G A T C

REST/MA0138.2/Jaspar

Match Rank:2
Score:0.79
Offset:-2
Orientation:forward strand
Alignment:--CARCACCWTGGAC------
TTCAGCACCATGGACAGCGCC
 A C G T A C G T A G T C C G T A C T A G A G T C C G T A A G T C A G T C C G A T A C G T A C T G A C T G G T C A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C A G T A G C T G A T C T C G A T A C G A T G C C G T A A T G C G A T C G C T A G A C T C T A G T C A G G T C A A T G C G C T A T C A G G T A C C A T G T A G C G A T C

PB0117.1_Eomes_2/Jaspar

Match Rank:3
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----CARCACCWTGGAC
NNGGCGACACCTCNNN-
 A C G T A C G T A C G T A C G T A G T C C G T A C T A G A G T C C G T A A G T C A G T C C G A T A C G T A C T G A C T G G T C A A G T C
A T C G T C G A T C A G A T C G T G A C C T A G G C T A A G T C C T G A A T G C A G T C G A C T G A T C A G T C T A C G A G T C A C G T

Esrra/MA0592.2/Jaspar

Match Rank:4
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CARCACCWTGGAC
-ATGACCTTGAA-
 A G T C C G T A C T A G A G T C C G T A A G T C A G T C C G A T A C G T A C T G A C T G G T C A A G T C
A C G T C G T A A G C T T A C G T G C A T G A C T G A C A G C T A G C T A T C G C T G A T G C A A C G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CARCACCWTGGAC
TGACACCT-----
 A G T C C G T A C T A G A G T C C G T A A G T C A G T C C G A T A C G T A C T G A C T G G T C A A G T C
G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T A C G T A C G T A C G T A C G T A C G T

TBX5/MA0807.1/Jaspar

Match Rank:6
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CARCACCWTGGAC
TCACACCT-----
 A G T C C G T A C T A G A G T C C G T A A G T C A G T C C G A T A C G T A C T G A C T G G T C A A G T C
G A C T T G A C T C G A A G T C T G C A G T A C A G T C G A C T A C G T A C G T A C G T A C G T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:7
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:CARCACCWTGGAC-
--TGACCTTGACCT
 A G T C C G T A C T A G A G T C C G T A A G T C A G T C C G A T A C G T A C T G A C T G G T C A A G T C A C G T
A C G T A C G T G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T

PB0014.1_Esrra_1/Jaspar

Match Rank:8
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---CARCACCWTGGAC-
NNNNATGACCTTGANTN
 A C G T A C G T A C G T A G T C C G T A C T A G A G T C C G T A A G T C A G T C C G A T A C G T A C T G A C T G G T C A A G T C A C G T
C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:9
Score:0.52
Offset:-5
Orientation:reverse strand
Alignment:-----CARCACCWTGGAC
SCTGTCARCACC------
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A C T A G A G T C C G T A A G T C A G T C C G A T A C G T A C T G A C T G G T C A A G T C
T A G C G A T C C G A T C A T G G C A T A G T C G T C A C T G A A G T C C T G A T A G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T

Nr2f6/MA0677.1/Jaspar

Match Rank:10
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:CARCACCWTGGAC---
--TGACCTTTGACCTN
 A G T C C G T A C T A G A G T C C G T A A G T C A G T C C G A T A C G T A C T G A C T G G T C A A G T C A C G T A C G T A C G T
A C G T A C G T A G C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T T C A G T G C A G T A C G T A C A G C T A G T C