Information for 7-CCAGCTGGMM (Motif 28)

G T A C G T A C C T G A T A C G G T A C G C A T T C A G T C A G G T A C T G A C
Reverse Opposite:
A C T G C A T G A G T C A G T C C G T A C A T G A T G C G A C T C A T G C A T G
p-value:1e-7
log p-value:-1.818e+01
Information Content per bp:1.611
Number of Target Sequences with motif46.0
Percentage of Target Sequences with motif6.57%
Number of Background Sequences with motif1239.2
Percentage of Background Sequences with motif2.56%
Average Position of motif in Targets51.9 +/- 26.8bp
Average Position of motif in Background50.6 +/- 29.8bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:1
Score:0.82
Offset:-2
Orientation:forward strand
Alignment:--CCAGCTGGMM
NAACAGCTGG--
 A C G T A C G T G T A C G T A C C T G A T A C G G T A C G C A T T C A G T C A G G T A C T G A C
C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G A C G T A C G T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:2
Score:0.82
Offset:-2
Orientation:forward strand
Alignment:--CCAGCTGGMM
NAHCAGCTGD--
 A C G T A C G T G T A C G T A C C T G A T A C G G T A C G C A T T C A G T C A G G T A C T G A C
G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T A C G T A C G T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:3
Score:0.81
Offset:-1
Orientation:reverse strand
Alignment:-CCAGCTGGMM-
GCCAGCTGBTNB
 A C G T G T A C G T A C C T G A T A C G G T A C G C A T T C A G T C A G G T A C T G A C A C G T
T C A G T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G C T T G C A A G T C

HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer

Match Rank:4
Score:0.80
Offset:0
Orientation:forward strand
Alignment:CCAGCTGGMM
VCAGCTGBNN
 G T A C G T A C C T G A T A C G G T A C G C A T T C A G T C A G G T A C T G A C
T G A C A T G C C G T A A T C G A T G C C A G T C A T G A C T G A G T C G T A C

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:5
Score:0.79
Offset:-1
Orientation:reverse strand
Alignment:-CCAGCTGGMM-
NVCAGCTGBBNN
 A C G T G T A C G T A C C T G A T A C G G T A C G C A T T C A G T C A G G T A C T G A C A C G T
T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:6
Score:0.77
Offset:1
Orientation:reverse strand
Alignment:CCAGCTGGMM
-CAGCTGNT-
 G T A C G T A C C T G A T A C G G T A C G C A T T C A G T C A G G T A C T G A C
A C G T G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--CCAGCTGGMM
CAGCAGCTGN--
 A C G T A C G T G T A C G T A C C T G A T A C G G T A C G C A T T C A G T C A G G T A C T G A C
T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T A C G T A C G T

Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer

Match Rank:8
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--CCAGCTGGMM
NAACAGCTGT--
 A C G T A C G T G T A C G T A C C T G A T A C G G T A C G C A T T C A G T C A G G T A C T G A C
T C A G T G C A T C G A A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C G T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:9
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-CCAGCTGGMM
GCCATCTGTT-
 A C G T G T A C G T A C C T G A T A C G G T A C G C A T T C A G T C A G G T A C T G A C
T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T A C G T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:10
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--CCAGCTGGMM
NNACAGCTGC--
 A C G T A C G T G T A C G T A C C T G A T A C G G T A C G C A T T C A G T C A G G T A C T G A C
C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T A C G T