Information for 18-GCACAGYTTGSTCTGT (Motif 22)

A C T G A G T C C G T A G T A C C G T A T C A G A G C T A G C T A C G T A C T G A T C G C G A T G A T C C G A T A T C G A C G T
Reverse Opposite:
G T C A A T G C G C T A C A T G C G T A T A G C G T A C T G C A C T G A T C G A A G T C A C G T A C T G C G A T A C T G G T A C
p-value:1e-9
log p-value:-2.095e+01
Information Content per bp:1.718
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.00%
Number of Background Sequences with motif12.4
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets45.6 +/- 28.0bp
Average Position of motif in Background44.9 +/- 20.8bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:1
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GCACAGYTTGSTCTGT
GVACAGNMTGTYCTB-
 A C T G A G T C C G T A G T A C C G T A T C A G A G C T A G C T A C G T A C T G A T C G C G A T G A T C C G A T A T C G A C G T
C T A G T C G A C G T A T A G C C G T A C A T G C G T A T G A C G C A T T A C G G A C T A G C T G A T C G A C T A C T G A C G T

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GCACAGYTTGSTCTGT
GRACAGWMTGTYCTB-
 A C T G A G T C C G T A G T A C C G T A T C A G A G C T A G C T A C G T A C T G A T C G C G A T G A T C C G A T A T C G A C G T
C T A G C T G A C T G A T A G C C G T A A T C G C G T A T G C A G A C T T C A G G C A T G A C T G A T C G A C T A C T G A C G T

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:3
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GCACAGYTTGSTCTGT
GAACADWATGTTCTT-
 A C T G A G T C C G T A G T A C C G T A T C A G A G C T A G C T A C G T A C T G A T C G C G A T G A T C C G A T A T C G A C G T
C T A G C G T A C G T A A G T C C G T A C A G T C G T A G T C A C G A T A C T G A C G T G C A T A G T C G A C T G C A T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:4
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GCACAGYTTGSTCTGT
GAGCACAGCAGGACA---
 A C G T A C G T A C T G A G T C C G T A G T A C C G T A T C A G A G C T A G C T A C G T A C T G A T C G C G A T G A T C C G A T A T C G A C G T
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A A C G T A C G T A C G T

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GCACAGYTTGSTCTGT
AGNACAGNCTGTTCTN-
 A C G T A C T G A G T C C G T A G T A C C G T A T C A G A G C T A G C T A C G T A C T G A T C G C G A T G A T C C G A T A T C G A C G T
C T G A C T A G T C G A C G T A A T G C C G T A A T C G C G A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T A G C T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:6
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GCACAGYTTGSTCTGT
-CACAGN---------
 A C T G A G T C C G T A G T A C C G T A T C A G A G C T A G C T A C G T A C T G A T C G C G A T G A T C C G A T A T C G A C G T
A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GCACAGYTTGSTCTGT
AGNACANNNTGTNCTN-
 A C G T A C T G A G T C C G T A G T A C C G T A T C A G A G C T A G C T A C G T A C T G A T C G C G A T G A T C C G A T A T C G A C G T
C T G A C T A G T C G A C G T A A G T C C T G A A T C G C G T A T A G C G A C T A C T G A C G T A G C T A G T C G A C T A T G C A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:8
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GCACAGYTTGSTCTGT
DCTCAGCAGG------
 A C T G A G T C C G T A G T A C C G T A T C A G A G C T A G C T A C G T A C T G A T C G C G A T G A T C C G A T A T C G A C G T
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T

PB0161.1_Rxra_2/Jaspar

Match Rank:9
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--GCACAGYTTGSTCTGT
TCGCGAAGGTTGTACT--
 A C G T A C G T A C T G A G T C C G T A G T A C C G T A T C A G A G C T A G C T A C G T A C T G A T C G C G A T G A T C C G A T A T C G A C G T
C A G T T G A C T C A G G T A C T C A G G C T A G C T A C T A G A C T G A C G T A G C T T C A G A G C T C G T A G T A C C A G T A C G T A C G T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:10
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GCACAGYTTGSTCTGT
GCAGTGATTT------
 A C T G A G T C C G T A G T A C C G T A T C A G A G C T A G C T A C G T A C T G A T C G C G A T G A T C C G A T A T C G A C G T
C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T