Information for 15-TGTTAAGACACTATAA (Motif 17)

A C G T A C T G C G A T G A C T C G T A C G T A C A T G G C T A A T G C C T G A T A G C A C G T C T G A C G A T C G T A C G T A
Reverse Opposite:
C G A T C G A T C G T A G A C T T C G A A C T G A G C T A T C G C G A T G A T C G C A T A C G T C G T A G C T A A G T C C G T A
p-value:1e-11
log p-value:-2.545e+01
Information Content per bp:1.740
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.86%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.0 +/- 20.5bp
Average Position of motif in Background53.4 +/- 18.5bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mecom/MA0029.1/Jaspar

Match Rank:1
Score:0.61
Offset:4
Orientation:forward strand
Alignment:TGTTAAGACACTATAA--
----AAGATAAGATAACA
 A C G T A C T G C G A T G A C T C G T A C G T A C A T G G C T A A T G C C T G A T A G C A C G T C T G A C G A T C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T C T G A C G T A A C T G C G T A G A C T C G T A C T G A A C T G C G T A A G C T G C T A C T G A A C G T G T C A

GATA1::TAL1/MA0140.2/Jaspar

Match Rank:2
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TGTTAAGACACTATAA-
CTGNNNNNNNCAGATAAG
 A C G T A C G T A C T G C G A T G A C T C G T A C G T A C A T G G C T A A T G C C T G A T A G C A C G T C T G A C G A T C G T A C G T A A C G T
T A G C C G A T A C T G A G T C C G A T A G T C A T G C C A G T A G T C T G C A T A G C C G T A A C T G C G T A A C G T C G T A C T G A A C T G

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:3
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---TGTTAAGACACTATAA
AGGTGTTAAT---------
 A C G T A C G T A C G T A C G T A C T G C G A T G A C T C G T A C G T A C A T G G C T A A T G C C T G A T A G C A C G T C T G A C G A T C G T A C G T A
C T G A C T A G A T C G C G A T C T A G G C A T A C G T C T G A C T G A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0022.1_Gata5_1/Jaspar

Match Rank:4
Score:0.52
Offset:-5
Orientation:forward strand
Alignment:-----TGTTAAGACACTATAA
TAAACTGATAAGAAGAT----
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G A T G A C T C G T A C G T A C A T G G C T A A T G C C T G A T A G C A C G T C T G A C G A T C G T A C G T A
G C A T C G T A C G T A C T G A A G T C G C A T A C T G C G T A C G A T G C T A C G T A T A C G T C G A T C G A C A T G C G T A C A G T A C G T A C G T A C G T A C G T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:5
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----TGTTAAGACACTATAA
AAGGTGTKAA----------
 A C G T A C G T A C G T A C G T A C G T A C T G C G A T G A C T C G T A C G T A C A T G G C T A A T G C C T G A T A G C A C G T C T G A C G A T C G T A C G T A
C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:6
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--TGTTAAGACACTATAA
RHTGWCAR----------
 A C G T A C G T A C G T A C T G C G A T G A C T C G T A C G T A C A T G G C T A A T G C C T G A T A G C A C G T C T G A C G A T C G T A C G T A
C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SMAD3/MA0795.1/Jaspar

Match Rank:7
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:TGTTAAGACACTATAA
TGTCTAGACG------
 A C G T A C T G C G A T G A C T C G T A C G T A C A T G G C T A A T G C C T G A T A G C A C G T C T G A C G A T C G T A C G T A
C G A T C A T G C A G T T A G C A C G T T C G A A T C G G C T A G A T C C T A G A C G T A C G T A C G T A C G T A C G T A C G T

GATA:SCL(Zf,bHLH)/Ter119-SCL-ChIP-Seq(GSE18720)/Homer

Match Rank:8
Score:0.50
Offset:-4
Orientation:forward strand
Alignment:----TGTTAAGACACTATAA
CNGCTGNNGNNNNCAGATAA
 A C G T A C G T A C G T A C G T A C G T A C T G C G A T G A C T C G T A C G T A C A T G G C T A A T G C C T G A T A G C A C G T C T G A C G A T C G T A C G T A
T G A C C T A G A C T G T A G C C G A T A C T G A T G C C A T G A T C G A T C G A T C G T A G C C T G A T A G C G C T A A C T G C G T A A G C T C G T A C T G A

PROX1/MA0794.1/Jaspar

Match Rank:9
Score:0.50
Offset:3
Orientation:forward strand
Alignment:TGTTAAGACACTATAA
---CAAGACGCCTTA-
 A C G T A C T G C G A T G A C T C G T A C G T A C A T G G C T A A T G C C T G A T A G C A C G T C T G A C G A T C G T A C G T A
A C G T A C G T A C G T A G T C C T G A G C T A C T A G T C G A G A T C C A T G G A T C A G T C C A G T A G C T T C G A A C G T

PH0158.1_Rhox11_2/Jaspar

Match Rank:10
Score:0.49
Offset:-7
Orientation:forward strand
Alignment:-------TGTTAAGACACTATAA
AGGACGCTGTAAAGGGA------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G A T G A C T C G T A C G T A C A T G G C T A A T G C C T G A T A G C A C G T C T G A C G A T C G T A C G T A
C G T A T C A G C A T G G T C A G A T C C T A G T A G C C A G T C T A G G A C T G C T A C G T A G C T A C T A G T A C G T C A G G C T A A C G T A C G T A C G T A C G T A C G T A C G T