Information for 11-TTTCAGGAGCKTCTCT (Motif 13)

G C A T C G A T A C G T A G T C C G T A C T A G A T C G C G T A A C T G A G T C C A T G A C G T A G T C A G C T G T A C A C G T
Reverse Opposite:
C G T A A C T G C T G A C T A G C G T A G T A C A C T G G T A C C G A T A T G C A G T C A C G T C T A G G T C A C G T A C G T A
p-value:1e-11
log p-value:-2.599e+01
Information Content per bp:1.765
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets66.6 +/- 18.9bp
Average Position of motif in Background81.4 +/- 6.6bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:1
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TTTCAGGAGCKTCTCT
ADGGYAGYAGCATCT--
 A C G T G C A T C G A T A C G T A G T C C G T A C T A G A T C G C G T A A C T G A G T C C A T G A C G T A G T C A G C T G T A C A C G T
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T A C G T A C G T

TCF4/MA0830.1/Jaspar

Match Rank:2
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:TTTCAGGAGCKTCTCT
-NNCAGGTGCG-----
 G C A T C G A T A C G T A G T C C G T A C T A G A T C G C G T A A C T G A G T C C A T G A C G T A G T C A G C T G T A C A C G T
A C G T G C T A T A C G G A T C C G T A A T C G T A C G A C G T C T A G A G T C C T A G A C G T A C G T A C G T A C G T A C G T

TCF3/MA0522.2/Jaspar

Match Rank:3
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:TTTCAGGAGCKTCTCT
-NNCAGGTGTN-----
 G C A T C G A T A C G T A G T C C G T A C T A G A T C G C G T A A C T G A G T C C A T G A C G T A G T C A G C T G T A C A C G T
A C G T G T C A T C A G A G T C C G T A A T C G T A C G C G A T A C T G A G C T C A G T A C G T A C G T A C G T A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:TTTCAGGAGCKTCTCT
-NNCAGGTGNN-----
 G C A T C G A T A C G T A G T C C G T A C T A G A T C G C G T A A C T G A G T C C A T G A C G T A G T C A G C T G T A C A C G T
A C G T C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G A C G T A C G T A C G T A C G T A C G T

PH0068.1_Hoxc13/Jaspar

Match Rank:5
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---TTTCAGGAGCKTCTCT
NAATTTTACGAGNTNN---
 A C G T A C G T A C G T G C A T C G A T A C G T A G T C C G T A C T A G A T C G C G T A A C T G A G T C C A T G A C G T A G T C A G C T G T A C A C G T
G C T A C T G A C G T A C G A T C G A T C G A T C G A T C T G A G A T C C T A G C T G A A T C G T G A C C G A T C G A T C G A T A C G T A C G T A C G T

HOXC13/MA0907.1/Jaspar

Match Rank:6
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-TTTCAGGAGCKTCTCT
NTTTTACGAGN------
 A C G T G C A T C G A T A C G T A G T C C G T A C T A G A T C G C G T A A C T G A G T C C A T G A C G T A G T C A G C T G T A C A C G T
C G A T C G A T C G A T C G A T G C A T G T C A A G T C C T A G T C G A A T C G T G A C A C G T A C G T A C G T A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:7
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:TTTCAGGAGCKTCTCT
----CGGAGC------
 G C A T C G A T A C G T A G T C C G T A C T A G A T C G C G T A A C T G A G T C C A T G A C G T A G T C A G C T G T A C A C G T
A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:8
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:TTTCAGGAGCKTCTCT
SDGCAGGTGCNS----
 G C A T C G A T A C G T A G T C C G T A C T A G A T C G C G T A A C T G A G T C C A T G A C G T A G T C A G C T G T A C A C G T
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C A C G T A C G T A C G T A C G T

PH0048.1_Hoxa13/Jaspar

Match Rank:9
Score:0.49
Offset:-3
Orientation:reverse strand
Alignment:---TTTCAGGAGCKTCTCT
ANATTTTACGAGNNNN---
 A C G T A C G T A C G T G C A T C G A T A C G T A G T C C G T A C T A G A T C G C G T A A C T G A G T C C A T G A C G T A G T C A G C T G T A C A C G T
G C T A T C G A C G T A C G A T C A G T C G A T C G A T C T G A A G T C C T A G C T G A A T C G T A C G C G A T G C A T C G A T A C G T A C G T A C G T

ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.49
Offset:1
Orientation:forward strand
Alignment:TTTCAGGAGCKTCTCT
-GTCWGCTGTYYCTCT
 G C A T C G A T A C G T A G T C C G T A C T A G A T C G C G T A A C T G A G T C C A T G A C G T A G T C A G C T G T A C A C G T
A C G T C T A G A C G T A G T C C G T A A C T G A G T C G C A T A C T G G C A T A G T C G A C T G A T C G C A T A G T C A G C T