Information for 6-CAAAAGACTATGA (Motif 11)

A G T C C G T A C G T A C G T A C G T A A C T G C T G A A G T C A C G T C T G A A C G T C T A G C G T A
Reverse Opposite:
C G A T A G T C C G T A A G C T C G T A A C T G A G C T A G T C A C G T A C G T A C G T A C G T A C T G
p-value:1e-11
log p-value:-2.599e+01
Information Content per bp:1.934
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets73.4 +/- 18.6bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0141.1_Isgf3g_2/Jaspar

Match Rank:1
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CAAAAGACTATGA
GCAAAACATTACTA
 A C G T A G T C C G T A C G T A C G T A C G T A A C T G C T G A A G T C A C G T C T G A A C G T C T A G C G T A
A C T G T A G C C G T A C G T A C G T A C T G A T A G C C G T A A C G T C A G T C G T A G T A C G A C T C T G A

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CAAAAGACTATGA-
---AAGGATATNTN
 A G T C C G T A C G T A C G T A C G T A A C T G C T G A A G T C A C G T C T G A A C G T C T A G C G T A A C G T
A C G T A C G T A C G T T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T

PB0071.1_Sox4_1/Jaspar

Match Rank:3
Score:0.55
Offset:-7
Orientation:forward strand
Alignment:-------CAAAAGACTATGA
AGAAGAACAAAGGACTA---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A C G T A A C T G C T G A A G T C A C G T C T G A A C G T C T A G C G T A
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A A C G T A C G T A C G T

PB0135.1_Hoxa3_2/Jaspar

Match Rank:4
Score:0.53
Offset:2
Orientation:forward strand
Alignment:CAAAAGACTATGA---
--AAAAACCATTAAGG
 A G T C C G T A C G T A C G T A C G T A A C T G C T G A A G T C A C G T C T G A A C G T C T A G C G T A A C G T A C G T A C G T
A C G T A C G T T C G A G T C A C T G A G C T A C G T A T G A C A G T C T G C A C G A T G C A T C G T A C T G A A T C G T C A G

Sox6/MA0515.1/Jaspar

Match Rank:5
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:CAAAAGACTATGA
---AAAACAATGG
 A G T C C G T A C G T A C G T A C G T A A C T G C T G A A G T C A C G T C T G A A C G T C T A G C G T A
A C G T A C G T A C G T T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G

PB0061.1_Sox11_1/Jaspar

Match Rank:6
Score:0.52
Offset:-7
Orientation:forward strand
Alignment:-------CAAAAGACTATGA
ATAAGAACAAAGGACTA---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A C G T A A C T G C T G A A G T C A C G T C T G A A C G T C T A G C G T A
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A A C G T A C G T A C G T

Sox17/MA0078.1/Jaspar

Match Rank:7
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:CAAAAGACTATGA-
-----GACAATGNN
 A G T C C G T A C G T A C G T A C G T A A C T G C T G A A G T C A C G T C T G A A C G T C T A G C G T A A C G T
A C G T A C G T A C G T A C G T A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:8
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--CAAAAGACTATGA
RACAAWGG-------
 A C G T A C G T A G T C C G T A C G T A C G T A C G T A A C T G C T G A A G T C A C G T C T G A A C G T C T A G C G T A
T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:9
Score:0.52
Offset:1
Orientation:forward strand
Alignment:CAAAAGACTATGA
-AAAAGTCAA---
 A G T C C G T A C G T A C G T A C G T A A C T G C T G A A G T C A C G T C T G A A C G T C T A G C G T A
A C G T G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:10
Score:0.51
Offset:-4
Orientation:reverse strand
Alignment:----CAAAAGACTATGA
AAAACAAAGG-------
 A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A C G T A A C T G C T G A A G T C A C G T C T G A A C G T C T A G C G T A
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T