Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer | 1e-88 | -2.029e+02 | 0.0000 | 247.0 | 34.79% | 3719.3 | 8.16% | motif file (matrix) |
svg |
2 |
| FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-86 | -1.984e+02 | 0.0000 | 271.0 | 38.17% | 4620.1 | 10.14% | motif file (matrix) |
svg |
3 |
| PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer | 1e-85 | -1.961e+02 | 0.0000 | 290.0 | 40.85% | 5366.1 | 11.77% | motif file (matrix) |
svg |
4 |
| ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer | 1e-83 | -1.923e+02 | 0.0000 | 103.0 | 14.51% | 443.6 | 0.97% | motif file (matrix) |
svg |
5 |
| GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer | 1e-74 | -1.725e+02 | 0.0000 | 102.0 | 14.37% | 529.2 | 1.16% | motif file (matrix) |
svg |
6 |
| Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-74 | -1.706e+02 | 0.0000 | 200.0 | 28.17% | 2813.4 | 6.17% | motif file (matrix) |
svg |
7 |
| FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer | 1e-73 | -1.697e+02 | 0.0000 | 224.0 | 31.55% | 3589.3 | 7.88% | motif file (matrix) |
svg |
8 |
| Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer | 1e-68 | -1.585e+02 | 0.0000 | 196.0 | 27.61% | 2901.9 | 6.37% | motif file (matrix) |
svg |
9 |
| PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer | 1e-67 | -1.557e+02 | 0.0000 | 104.0 | 14.65% | 667.0 | 1.46% | motif file (matrix) |
svg |
10 |
| GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer | 1e-64 | -1.477e+02 | 0.0000 | 71.0 | 10.00% | 241.4 | 0.53% | motif file (matrix) |
svg |
11 |
| FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer | 1e-55 | -1.288e+02 | 0.0000 | 63.0 | 8.87% | 222.0 | 0.49% | motif file (matrix) |
svg |
12 |
| Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer | 1e-50 | -1.173e+02 | 0.0000 | 185.0 | 26.06% | 3387.2 | 7.43% | motif file (matrix) |
svg |
13 |
| Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer | 1e-50 | -1.163e+02 | 0.0000 | 106.0 | 14.93% | 1064.7 | 2.34% | motif file (matrix) |
svg |
14 |
| FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer | 1e-50 | -1.162e+02 | 0.0000 | 174.0 | 24.51% | 3033.3 | 6.66% | motif file (matrix) |
svg |
15 |
| FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer | 1e-47 | -1.088e+02 | 0.0000 | 193.0 | 27.18% | 3891.0 | 8.54% | motif file (matrix) |
svg |
16 |
| Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer | 1e-46 | -1.079e+02 | 0.0000 | 164.0 | 23.10% | 2879.3 | 6.32% | motif file (matrix) |
svg |
17 |
| FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer | 1e-36 | -8.457e+01 | 0.0000 | 125.0 | 17.61% | 2106.7 | 4.62% | motif file (matrix) |
svg |
18 |
| FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer | 1e-36 | -8.323e+01 | 0.0000 | 107.0 | 15.07% | 1576.0 | 3.46% | motif file (matrix) |
svg |
19 |
| AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer | 1e-25 | -5.949e+01 | 0.0000 | 257.0 | 36.20% | 8716.4 | 19.13% | motif file (matrix) |
svg |
20 |
| Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer | 1e-23 | -5.525e+01 | 0.0000 | 189.0 | 26.62% | 5639.4 | 12.37% | motif file (matrix) |
svg |
21 |
| HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer | 1e-12 | -2.990e+01 | 0.0000 | 108.0 | 15.21% | 3237.3 | 7.10% | motif file (matrix) |
svg |
22 |
| HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer | 1e-12 | -2.865e+01 | 0.0000 | 112.0 | 15.77% | 3484.6 | 7.65% | motif file (matrix) |
svg |
23 |
| GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer | 1e-9 | -2.163e+01 | 0.0000 | 38.0 | 5.35% | 743.7 | 1.63% | motif file (matrix) |
svg |
24 |
| NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-7 | -1.816e+01 | 0.0000 | 15.0 | 2.11% | 142.4 | 0.31% | motif file (matrix) |
svg |
25 |
| ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer | 1e-5 | -1.215e+01 | 0.0001 | 45.0 | 6.34% | 1391.1 | 3.05% | motif file (matrix) |
svg |
26 |
| NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-4 | -1.146e+01 | 0.0001 | 88.0 | 12.39% | 3528.4 | 7.74% | motif file (matrix) |
svg |
27 |
| GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-4 | -1.103e+01 | 0.0002 | 15.0 | 2.11% | 254.9 | 0.56% | motif file (matrix) |
svg |
28 |
| Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer | 1e-4 | -1.092e+01 | 0.0002 | 39.0 | 5.49% | 1194.1 | 2.62% | motif file (matrix) |
svg |
29 |
| CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer | 1e-4 | -1.092e+01 | 0.0002 | 70.0 | 9.86% | 2663.2 | 5.84% | motif file (matrix) |
svg |
30 |
| Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer | 1e-4 | -1.049e+01 | 0.0003 | 59.0 | 8.31% | 2155.2 | 4.73% | motif file (matrix) |
svg |
31 |
| Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer | 1e-4 | -9.358e+00 | 0.0010 | 51.0 | 7.18% | 1853.9 | 4.07% | motif file (matrix) |
svg |
32 |
| Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer | 1e-3 | -8.726e+00 | 0.0018 | 19.0 | 2.68% | 461.4 | 1.01% | motif file (matrix) |
svg |
33 |
| Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer | 1e-3 | -8.376e+00 | 0.0025 | 100.0 | 14.08% | 4507.2 | 9.89% | motif file (matrix) |
svg |
34 |
| NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-3 | -7.833e+00 | 0.0042 | 15.0 | 2.11% | 341.9 | 0.75% | motif file (matrix) |
svg |
35 |
| THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer | 1e-3 | -7.649e+00 | 0.0050 | 155.0 | 21.83% | 7730.7 | 16.96% | motif file (matrix) |
svg |
36 |
| Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer | 1e-3 | -7.256e+00 | 0.0071 | 51.0 | 7.18% | 2031.2 | 4.46% | motif file (matrix) |
svg |
37 |
| ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer | 1e-3 | -7.037e+00 | 0.0086 | 46.0 | 6.48% | 1798.4 | 3.95% | motif file (matrix) |
svg |
38 |
| Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer | 1e-3 | -7.033e+00 | 0.0086 | 37.0 | 5.21% | 1353.1 | 2.97% | motif file (matrix) |
svg |
39 |
| SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer | 1e-2 | -6.614e+00 | 0.0125 | 47.0 | 6.62% | 1888.7 | 4.14% | motif file (matrix) |
svg |
40 |
| GATA:SCL(Zf,bHLH)/Ter119-SCL-ChIP-Seq(GSE18720)/Homer | 1e-2 | -6.144e+00 | 0.0195 | 9.0 | 1.27% | 177.9 | 0.39% | motif file (matrix) |
svg |
41 |
| ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer | 1e-2 | -6.119e+00 | 0.0195 | 12.0 | 1.69% | 287.2 | 0.63% | motif file (matrix) |
svg |
42 |
| Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer | 1e-2 | -6.038e+00 | 0.0207 | 40.0 | 5.63% | 1586.5 | 3.48% | motif file (matrix) |
svg |
43 |
| PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer | 1e-2 | -5.914e+00 | 0.0229 | 6.0 | 0.85% | 87.6 | 0.19% | motif file (matrix) |
svg |
44 |
| TATA-Box(TBP)/Promoter/Homer | 1e-2 | -5.821e+00 | 0.0245 | 74.0 | 10.42% | 3421.4 | 7.51% | motif file (matrix) |
svg |
45 |
| GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-2 | -5.589e+00 | 0.0303 | 88.0 | 12.39% | 4237.8 | 9.30% | motif file (matrix) |
svg |
46 |
| Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer | 1e-2 | -5.502e+00 | 0.0323 | 50.0 | 7.04% | 2161.7 | 4.74% | motif file (matrix) |
svg |
47 |
| Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer | 1e-2 | -5.494e+00 | 0.0323 | 15.0 | 2.11% | 435.1 | 0.95% | motif file (matrix) |
svg |
48 |
| Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer | 1e-2 | -5.103e+00 | 0.0461 | 59.0 | 8.31% | 2696.2 | 5.92% | motif file (matrix) |
svg |
49 |
| Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer | 1e-2 | -5.025e+00 | 0.0488 | 36.0 | 5.07% | 1479.4 | 3.25% | motif file (matrix) |
svg |
50 |
| Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer | 1e-2 | -5.005e+00 | 0.0488 | 33.0 | 4.65% | 1327.3 | 2.91% | motif file (matrix) |
svg |
51 |
| Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer | 1e-2 | -4.910e+00 | 0.0526 | 102.0 | 14.37% | 5155.7 | 11.31% | motif file (matrix) |
svg |
52 |
| Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer | 1e-2 | -4.881e+00 | 0.0531 | 44.0 | 6.20% | 1914.3 | 4.20% | motif file (matrix) |
svg |
53 |
| Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer | 1e-2 | -4.737e+00 | 0.0602 | 101.0 | 14.23% | 5130.2 | 11.26% | motif file (matrix) |
svg |
54 |
| Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer | 1e-2 | -4.716e+00 | 0.0603 | 16.0 | 2.25% | 521.2 | 1.14% | motif file (matrix) |
svg |