Information for 5-GAAGACATATAAA (Motif 9)

T A C G C G T A C G T A A C T G C G T A A G T C C G T A A C G T G T C A A C G T C G T A C G T A C G T A
Reverse Opposite:
C G A T A C G T C G A T C G T A A C G T C G T A C G A T A C T G A C G T G T A C A C G T A C G T A T G C
p-value:1e-10
log p-value:-2.416e+01
Information Content per bp:1.863
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.99%
Number of Background Sequences with motif7.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets46.4 +/- 28.4bp
Average Position of motif in Background58.7 +/- 18.4bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PROX1/MA0794.1/Jaspar

Match Rank:1
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GAAGACATATAAA
CAAGACGCCTTA-
 T A C G C G T A C G T A A C T G C G T A A G T C C G T A A C G T G T C A A C G T C G T A C G T A C G T A
A G T C C T G A G C T A C T A G T C G A G A T C C A T G G A T C A G T C C A G T A G C T T C G A A C G T

PH0085.1_Irx4/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GAAGACATATAAA---
AATATACATGTAAAACA
 A C G T T A C G C G T A C G T A A C T G C G T A A G T C C G T A A C G T G T C A A C G T C G T A C G T A C G T A A C G T A C G T A C G T
C G T A C G T A G C A T C T G A C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G T C A C G T A C G T A A G T C C G T A

PH0083.1_Irx3_1/Jaspar

Match Rank:3
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GAAGACATATAAA---
AAAATACATGTAATACT
 A C G T T A C G C G T A C G T A A C T G C G T A A G T C C G T A A C G T G T C A A C G T C G T A C G T A C G T A A C G T A C G T A C G T
C G T A C T G A C G A T C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A T G C A C G A T C G T A G A T C C G A T

PH0086.1_Irx5/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GAAGACATATAAA---
AATATACATGTAAAATT
 A C G T T A C G C G T A C G T A A C T G C G T A A G T C C G T A A C G T G T C A A C G T C G T A C G T A C G T A A C G T A C G T A C G T
C G A T C G T A C G A T G C T A C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A G T C A C G T A C G T A A C G T C G A T

PH0082.1_Irx2/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GAAGACATATAAA---
TAAATACATGTAAAATT
 A C G T T A C G C G T A C G T A A C T G C G T A A G T C C G T A A C G T G T C A A C G T C G T A C G T A C G T A A C G T A C G T A C G T
C G A T C G T A C G T A C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A C G T A C T G A C G T A A C G T G C A T

PH0087.1_Irx6/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GAAGACATATAAA---
AAAATACATGTAAAAAT
 A C G T T A C G C G T A C G T A A C T G C G T A A G T C C G T A A C G T G T C A A C G T C G T A C G T A C G T A A C G T A C G T A C G T
G C T A G C T A G C T A C T G A C G A T C G T A A G T C C G T A G C A T C T A G C G A T G C T A G T C A C G T A C G T A G C T A C G A T

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:7
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:GAAGACATATAAA-
----CCYMATAAAA
 T A C G C G T A C G T A A C T G C G T A A G T C C G T A A C G T G T C A A C G T C G T A C G T A C G T A A C G T
A C G T A C G T A C G T A C G T T G A C A T G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A

PH0084.1_Irx3_2/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GAAGACATATAAA---
AATATACATGTAATATA
 A C G T T A C G C G T A C G T A A C T G C G T A A G T C C G T A A C G T G T C A A C G T C G T A C G T A C G T A A C G T A C G T A C G T
C G T A C G T A C G A T C G T A C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A T C G A C G A T C G T A G A C T C G A T

PB0198.1_Zfp128_2/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GAAGACATATAAA
TGTATATATATACC
 A C G T T A C G C G T A C G T A A C T G C G T A A G T C C G T A A C G T G T C A A C G T C G T A C G T A C G T A
C A G T C A T G G C A T C T G A G C A T C T G A G A C T C G T A G A C T C G T A G A C T C G T A T G A C A T G C

POL012.1_TATA-Box/Jaspar

Match Rank:10
Score:0.56
Offset:6
Orientation:forward strand
Alignment:GAAGACATATAAA--------
------GTATAAAAGGCGGGG
 T A C G C G T A C G T A A C T G C G T A A G T C C G T A A C G T G T C A A C G T C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G