Information for 2-HWDAGYAAACADH (Motif 2)

G A T C G C A T C T A G C G T A C T A G G A C T C G T A G T C A C G T A A G T C C G T A C T G A G C A T
Reverse Opposite:
C G T A G A C T C G A T C T A G A C G T A C G T A C G T C T G A G A T C G C A T G A T C C G T A C T A G
p-value:1e-87
log p-value:-2.011e+02
Information Content per bp:1.602
Number of Target Sequences with motif246.0
Percentage of Target Sequences with motif34.65%
Number of Background Sequences with motif3720.0
Percentage of Background Sequences with motif8.16%
Average Position of motif in Targets47.8 +/- 23.2bp
Average Position of motif in Background50.0 +/- 32.3bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:1
Score:0.92
Offset:1
Orientation:reverse strand
Alignment:HWDAGYAAACADH
-WAAGTAAAYA--
 G A T C G C A T C T A G C G T A C T A G G A C T C G T A G T C A C G T A A G T C C G T A C T G A G C A T
A C G T G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A A C G T A C G T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.92
Offset:1
Orientation:forward strand
Alignment:HWDAGYAAACADH
-AAAGTAAACA--
 G A T C G C A T C T A G C G T A C T A G G A C T C G T A G T C A C G T A A G T C C G T A C T G A G C A T
A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:3
Score:0.92
Offset:1
Orientation:forward strand
Alignment:HWDAGYAAACADH
-AAAGTAAACA--
 G A T C G C A T C T A G C G T A C T A G G A C T C G T A G T C A C G T A A G T C C G T A C T G A G C A T
A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T

FOXA1/MA0148.3/Jaspar

Match Rank:4
Score:0.92
Offset:0
Orientation:reverse strand
Alignment:HWDAGYAAACADH--
CAAAGTAAACANNNN
 G A T C G C A T C T A G C G T A C T A G G A C T C G T A G T C A C G T A A G T C C G T A C T G A G C A T A C G T A C G T
G T A C G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C G C T A C G A T T A C G T C A G C T G A

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:5
Score:0.91
Offset:-4
Orientation:forward strand
Alignment:----HWDAGYAAACADH
NNNVCTGWGYAAACASN
 A C G T A C G T A C G T A C G T G A T C G C A T C T A G C G T A C T A G G A C T C G T A G T C A C G T A A G T C C G T A C T G A G C A T
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A

Foxa2/MA0047.2/Jaspar

Match Rank:6
Score:0.91
Offset:-1
Orientation:reverse strand
Alignment:-HWDAGYAAACADH
NCTAAGTAAACA--
 A C G T G A T C G C A T C T A G C G T A C T A G G A C T C G T A G T C A C G T A A G T C C G T A C T G A G C A T
T A G C G T A C G C A T T C G A C G T A C T A G A G C T G T C A T G C A C G T A A G T C C G T A A C G T A C G T

FOXC2/MA0846.1/Jaspar

Match Rank:7
Score:0.90
Offset:1
Orientation:forward strand
Alignment:HWDAGYAAACADH
-TAAGTAAACAAA
 G A T C G C A T C T A G C G T A C T A G G A C T C G T A G T C A C G T A A G T C C G T A C T G A G C A T
A C G T G C A T C T G A G C T A T C A G G A C T G T C A G T C A C T G A A G T C C T G A G C T A G C T A

FOXD2/MA0847.1/Jaspar

Match Rank:8
Score:0.90
Offset:4
Orientation:forward strand
Alignment:HWDAGYAAACADH
----GTAAACA--
 G A T C G C A T C T A G C G T A C T A G G A C T C G T A G T C A C G T A A G T C C G T A C T G A G C A T
A C G T A C G T A C G T A C G T T C A G G A C T G T C A G T C A C G T A A G T C C T G A A C G T A C G T

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:9
Score:0.89
Offset:-1
Orientation:reverse strand
Alignment:-HWDAGYAAACADH-
NCWRWGTAAACANSV
 A C G T G A T C G C A T C T A G C G T A C T A G G A C T C G T A G T C A C G T A A G T C C G T A C T G A G C A T A C G T
T G A C G A T C G C A T C T G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C G T A A T C G T C A G

MF0005.1_Forkhead_class/Jaspar

Match Rank:10
Score:0.89
Offset:2
Orientation:reverse strand
Alignment:HWDAGYAAACADH
--AAATAAACA--
 G A T C G C A T C T A G C G T A C T A G G A C T C G T A G T C A C G T A A G T C C G T A C T G A G C A T
A C G T A C G T T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A A C G T A C G T