Information for 9-SCAKKCAGMRTCY (Motif 14)

A T C G A G T C C G T A A C T G A C T G A G T C C G T A A C T G G T A C T C A G A C G T A G T C A G T C
Reverse Opposite:
C T A G A C T G C G T A A G T C A C T G A G T C A C G T A C T G G T A C G T A C A C G T A C T G A T G C
p-value:1e-9
log p-value:-2.217e+01
Information Content per bp:1.823
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.8 +/- 25.1bp
Average Position of motif in Background34.6 +/- 16.1bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFYA/MA0060.2/Jaspar

Match Rank:1
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----SCAKKCAGMRTCY-
TGGACCAATCAGCACTCT
 A C G T A C G T A C G T A C G T A T C G A G T C C G T A A C T G A C T G A G T C C G T A A C T G G T A C T C A G A C G T A G T C A G T C A C G T
A G C T A T C G T C A G C T G A A T G C A G T C C G T A T C G A G A C T T A G C T C G A T C A G T G A C C T G A A T G C A C G T G T A C C G A T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:SCAKKCAGMRTCY
CCAGACAG-----
 A T C G A G T C C G T A A C T G A C T G A G T C C G T A A C T G G T A C T C A G A C G T A G T C A G T C
A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:3
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:SCAKKCAGMRTCY
TGAGTCAGCA---
 A T C G A G T C C G T A A C T G A C T G A G T C C G T A A C T G G T A C T C A G A C G T A G T C A G T C
G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T A C G T A C G T

Mafb/MA0117.2/Jaspar

Match Rank:4
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:SCAKKCAGMRTCY-
--NGTCAGCANTTT
 A T C G A G T C C G T A A C T G A C T G A G T C C G T A A C T G G T A C T C A G A C G T A G T C A G T C A C G T
A C G T A C G T G T C A T A C G A G C T G T A C C T G A C A T G T A G C C T G A G C A T C G A T G C A T G C A T

POL002.1_INR/Jaspar

Match Rank:5
Score:0.54
Offset:4
Orientation:forward strand
Alignment:SCAKKCAGMRTCY
----TCAGTCTT-
 A T C G A G T C C G T A A C T G A C T G A G T C C G T A A C T G G T A C T C A G A C G T A G T C A G T C
A C G T A C G T A C G T A C G T C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T A C G T

Dux/MA0611.1/Jaspar

Match Rank:6
Score:0.52
Offset:0
Orientation:forward strand
Alignment:SCAKKCAGMRTCY
CCAATCAA-----
 A T C G A G T C C G T A A C T G A C T G A G T C C G T A A C T G G T A C T C A G A C G T A G T C A G T C
A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T

NFYB/MA0502.1/Jaspar

Match Rank:7
Score:0.52
Offset:-7
Orientation:forward strand
Alignment:-------SCAKKCAGMRTCY
AAATGGACCAATCAG-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G T C C G T A A C T G A C T G A G T C C G T A A C T G G T A C T C A G A C G T A G T C A G T C
T C G A G T C A G T C A A G C T A T C G T C A G C T G A A G T C A G T C C G T A C T G A A C G T T A G C T C G A T A C G A C G T A C G T A C G T A C G T A C G T

PB0042.1_Mafk_1/Jaspar

Match Rank:8
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:SCAKKCAGMRTCY---
-AAGTCAGCANTTTTN
 A T C G A G T C C G T A A C T G A C T G A G T C C G T A A C T G G T A C T C A G A C G T A G T C A G T C A C G T A C G T A C G T
A C G T C T G A C G T A T C A G C G A T G T A C C G T A C A T G G T A C C T G A G C A T C G A T G C A T G C A T G C A T G C T A

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:SCAKKCAGMRTCY
CCAGACRSVB---
 A T C G A G T C C G T A A C T G A C T G A G T C C G T A A C T G G T A C T C A G A C G T A G T C A G T C
T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:10
Score:0.51
Offset:-5
Orientation:forward strand
Alignment:-----SCAKKCAGMRTCY
CAAATCCAGACATCACA-
 A C G T A C G T A C G T A C G T A C G T A T C G A G T C C G T A A C T G A C T G A G T C C G T A A C T G G T A C T C A G A C G T A G T C A G T C
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A A C G T