Information for 7-CTTTGGTACA (Motif 10)

A G T C C G A T A C G T C G A T A C T G C T A G C A G T C G T A A T G C C G T A
Reverse Opposite:
A C G T A T C G A C G T G T C A A G T C G T A C C G T A G T C A C G T A T C A G
p-value:1e-10
log p-value:-2.370e+01
Information Content per bp:1.843
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.54%
Number of Background Sequences with motif148.2
Percentage of Background Sequences with motif0.33%
Average Position of motif in Targets48.9 +/- 26.1bp
Average Position of motif in Background53.8 +/- 31.9bp
Strand Bias (log2 ratio + to - strand density)-1.4
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

DMRT3/MA0610.1/Jaspar

Match Rank:1
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:CTTTGGTACA--
-NTTGATACATT
 A G T C C G A T A C G T C G A T A C T G C T A G C A G T C G T A A T G C C G T A A C G T A C G T
A C G T C G T A C G A T A C G T A C T G G C T A A C G T C G T A A G T C C G T A C G A T A C G T

PB0096.1_Zfp187_1/Jaspar

Match Rank:2
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-CTTTGGTACA---
TTATTAGTACATAN
 A C G T A G T C C G A T A C G T C G A T A C T G C T A G C A G T C G T A A T G C C G T A A C G T A C G T A C G T
C A G T C G A T C G T A G A C T C G A T T C G A C T A G G A C T G C T A A G T C C T G A A G C T C T G A T C G A

PB0158.1_Rfx3_2/Jaspar

Match Rank:3
Score:0.63
Offset:-7
Orientation:forward strand
Alignment:-------CTTTGGTACA------
ACTGACCCTTGGTTACCACAAAG
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T A C G T C G A T A C T G C T A G C A G T C G T A A T G C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
T G C A A G T C A C G T A T C G G C T A A T G C T A C G A T G C G C A T C G A T T C A G A C T G C G A T C A G T C G T A G A T C T G A C T C G A T G A C T C G A T C G A C G T A A T C G

PB0159.1_Rfx4_2/Jaspar

Match Rank:4
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CTTTGGTACA--
TACCCTAGTTACCGA
 A C G T A C G T A C G T A G T C C G A T A C G T C G A T A C T G C T A G C A G T C G T A A T G C C G T A A C G T A C G T
G C A T G T C A A T G C A T G C G T A C C A G T T C G A A C T G C G A T A C G T C G T A A G T C T A G C T A C G G T C A

NFIA/MA0670.1/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CTTTGGTACA
NNTTGGCANN
 A G T C C G A T A C G T C G A T A C T G C T A G C A G T C G T A A T G C C G T A
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:6
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CTTTGGTACA-
-CCAGGAACAG
 A G T C C G A T A C G T C G A T A C T G C T A G C A G T C G T A A T G C C G T A A C G T
A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CTTTGGTACA--
--TTGCAACATN
 A G T C C G A T A C G T C G A T A C T G C T A G C A G T C G T A A T G C C G T A A C G T A C G T
A C G T A C G T C A G T A C G T C T A G A G T C G T C A C G T A G A T C G C T A A G C T G A T C

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:8
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CTTTGGTACA----
CTACTTGGATACGGAAT
 A C G T A C G T A C G T A G T C C G A T A C G T C G A T A C T G C T A G C A G T C G T A A T G C C G T A A C G T A C G T A C G T A C G T
A T G C A C G T T C G A A T G C C A G T G A C T T C A G A C T G C G T A A C G T C G T A G A T C T A C G T A C G C G T A C G T A G C A T

PB0082.1_Tcf3_1/Jaspar

Match Rank:9
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----CTTTGGTACA--
NNTTCCTTTGATCTANA
 A C G T A C G T A C G T A C G T A C G T A G T C C G A T A C G T C G A T A C T G C T A G C A G T C G T A A T G C C G T A A C G T A C G T
C G A T C G A T C G A T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T C T G A

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:10
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----CTTTGGTACA--
ATTTCCTTTGATCTATA
 A C G T A C G T A C G T A C G T A C G T A G T C C G A T A C G T C G A T A C T G C T A G C A G T C G T A A T G C C G T A A C G T A C G T
C G T A C G A T C A G T A G C T A G T C A G T C G A C T G A C T C G A T A C T G C G T A C G A T T A G C G C A T C G T A C A G T T G C A