Information for 13-CCTCTCTCTTGGC (Motif 20)

A G T C A G T C A C G T A G T C A C G T A G T C A C G T A G T C A C G T C G A T A C T G A T C G A G T C
Reverse Opposite:
A C T G A T G C A G T C C G T A C G T A A C T G C G T A A C T G C G T A A C T G C G T A C T A G A C T G
p-value:1e-8
log p-value:-1.971e+01
Information Content per bp:1.924
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets56.5 +/- 26.9bp
Average Position of motif in Background50.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIX/MA0671.1/Jaspar

Match Rank:1
Score:0.55
Offset:7
Orientation:reverse strand
Alignment:CCTCTCTCTTGGC---
-------NTTGGCANN
 A G T C A G T C A C G T A G T C A C G T A G T C A C G T A G T C A C G T C G A T A C T G A T C G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CCTCTCTCTTGGC
ACTTTCACTTTC-
 A G T C A G T C A C G T A G T C A C G T A G T C A C G T A G T C A C G T C G A T A C T G A T C G A G T C
T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C A C G T

Gata1/MA0035.3/Jaspar

Match Rank:3
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CCTCTCTCTTGGC
TTCTTATCTGT----
 A C G T A C G T A G T C A G T C A C G T A G T C A C G T A G T C A C G T A G T C A C G T C G A T A C T G A T C G A G T C
A G C T A G C T A G T C A G C T A C G T C G T A A C G T A G T C C G A T A T C G G A C T A C G T A C G T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:4
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:CCTCTCTCTTGGC---
------NNTTGGCANN
 A G T C A G T C A C G T A G T C A C G T A G T C A C G T A G T C A C G T C G A T A C T G A T C G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

NFIC/MA0161.1/Jaspar

Match Rank:5
Score:0.53
Offset:8
Orientation:forward strand
Alignment:CCTCTCTCTTGGC-
--------TTGGCA
 A G T C A G T C A C G T A G T C A C G T A G T C A C G T A G T C A C G T C G A T A C T G A T C G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A

Gata4/MA0482.1/Jaspar

Match Rank:6
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CCTCTCTCTTGGC
TCTTATCTCCC---
 A C G T A G T C A G T C A C G T A G T C A C G T A G T C A C G T A G T C A C G T C G A T A C T G A T C G A G T C
A G C T A T G C A G C T A C G T G T C A A C G T A G T C C G A T A T G C G A T C A G T C A C G T A C G T A C G T

PB0137.1_Irf3_2/Jaspar

Match Rank:7
Score:0.51
Offset:-5
Orientation:reverse strand
Alignment:-----CCTCTCTCTTGGC
NNGCACCTTTCTCC----
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C G T A G T C A C G T A G T C A C G T A G T C A C G T C G A T A C T G A T C G A G T C
A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C A C G T A C G T A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.51
Offset:7
Orientation:reverse strand
Alignment:CCTCTCTCTTGGC--
-------CTTGGCAA
 A G T C A G T C A C G T A G T C A C G T A G T C A C G T A G T C A C G T C G A T A C T G A T C G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A

PRDM1/MA0508.1/Jaspar

Match Rank:9
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--CCTCTCTCTTGGC
TCACTTTCACTTTCN
 A C G T A C G T A G T C A G T C A C G T A G T C A C G T A G T C A C G T A G T C A C G T C G A T A C T G A T C G A G T C
G A C T G A T C T G C A A G T C G C A T G A C T A C G T A G T C G T C A G A T C A G C T A G C T G A C T G A T C G C A T

PB0139.1_Irf5_2/Jaspar

Match Rank:10
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---CCTCTCTCTTGGC
NNAATTCTCGNTNAN-
 A C G T A C G T A C G T A G T C A G T C A C G T A G T C A C G T A G T C A C G T A G T C A C G T C G A T A C T G A T C G A G T C
A T C G T A C G C T G A C T G A G A C T G A C T T A G C A G C T A G T C C A T G C T A G G C A T G A T C C G T A T C G A A C G T