Information for 9-GCCCAAATAAACT (Motif 14)

A C T G A T G C G A T C G T A C G T C A G T C A C T G A A G C T C G T A G C T A C G T A A G T C G A C T
Reverse Opposite:
C G T A A C T G G C A T C A G T C G A T T C G A A G C T A C G T C A G T C A T G C T A G T A C G G T A C
p-value:1e-10
log p-value:-2.311e+01
Information Content per bp:1.682
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif4.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets66.2 +/- 24.8bp
Average Position of motif in Background64.6 +/- 14.5bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GCCCAAATAAACT--
TGCCAAAATAAACANN
 A C G T A C T G A T G C G A T C G T A C G T C A G T C A C T G A A G C T C G T A G C T A C G T A A G T C G A C T A C G T A C G T
C G A T A C T G T A G C G T A C C G T A C T G A C T G A C T G A G A C T G T C A G T C A C T G A A G T C C G T A C T G A G C T A

Foxq1/MA0040.1/Jaspar

Match Rank:2
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:GCCCAAATAAACT---
-----AATAAACAATN
 A C T G A T G C G A T C G T A C G T C A G T C A C T G A A G C T C G T A G C T A C G T A A G T C G A C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A T G C A A G C T C G T A C G T A C G T A A G T C C G T A C G T A A G C T C G T A

MF0005.1_Forkhead_class/Jaspar

Match Rank:3
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:GCCCAAATAAACT
----AAATAAACA
 A C T G A T G C G A T C G T A C G T C A G T C A C T G A A G C T C G T A G C T A C G T A A G T C G A C T
A C G T A C G T A C G T A C G T T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A

Foxd3/MA0041.1/Jaspar

Match Rank:4
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:GCCCAAATAAACT---
----AAACAAACATTC
 A C T G A T G C G A T C G T A C G T C A G T C A C T G A A G C T C G T A G C T A C G T A A G T C G A C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C

PB0116.1_Elf3_2/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GCCCAAATAAACT--
GTTCAAAAAAAAAATTC
 A C G T A C G T A C T G A T G C G A T C G T A C G T C A G T C A C T G A A G C T C G T A G C T A C G T A A G T C G A C T A C G T A C G T
C A T G A G C T A C G T G T A C G T C A C G T A G C T A G C T A G C T A G C T A G C T A G C T A G C T A G T C A G A C T C G A T G A T C

PB0121.1_Foxj3_2/Jaspar

Match Rank:6
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GCCCAAATAAACT-
AACACCAAAACAAAGGA
 A C G T A C G T A C G T A C T G A T G C G A T C G T A C G T C A G T C A C T G A A G C T C G T A G C T A C G T A A G T C G A C T A C G T
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

PB0123.1_Foxl1_2/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GCCCAAATAAACT-
ATATCAAAACAAAACA
 A C G T A C G T A C T G A T G C G A T C G T A C G T C A G T C A C T G A A G C T C G T A G C T A C G T A A G T C G A C T A C G T
G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A

HOXB13/MA0901.1/Jaspar

Match Rank:8
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GCCCAAATAAACT
---CCAATAAAAC
 A C T G A T G C G A T C G T A C G T C A G T C A C T G A A G C T C G T A G C T A C G T A A G T C G A C T
A C G T A C G T A C G T T A G C G A T C G T C A C G T A A G C T C G T A C G T A G T C A G T C A G T A C

HOXA13/MA0650.1/Jaspar

Match Rank:9
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GCCCAAATAAACT
---CCAATAAAAA
 A C T G A T G C G A T C G T A C G T C A G T C A C T G A A G C T C G T A G C T A C G T A A G T C G A C T
A C G T A C G T A C G T T A G C A G T C G T C A C G T A A C G T G C T A C G T A G T C A T G C A G T C A

PB0186.1_Tcf3_2/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GCCCAAATAAACT
AGCCGAAAAAAAAAT
 A C G T A C G T A C T G A T G C G A T C G T A C G T C A G T C A C T G A A G C T C G T A G C T A C G T A A G T C G A C T
C T G A T A C G A T G C T A G C A C T G C G T A C T G A G C T A G C T A G C T A T G C A G C T A T C G A G C T A G C A T