Information for 6-TGCATATCAT (Motif 14)

A C G T A C T G A G T C C G T A C A G T C T G A A C G T A G T C C G T A A C G T
Reverse Opposite:
G T C A C G A T A C T G C G T A A G C T G T C A C G A T A C T G A G T C C G T A
p-value:1e-8
log p-value:-1.962e+01
Information Content per bp:1.873
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif4.20%
Number of Background Sequences with motif158.4
Percentage of Background Sequences with motif0.35%
Average Position of motif in Targets62.2 +/- 26.2bp
Average Position of motif in Background49.7 +/- 31.8bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---TGCATATCAT
ATTTGCATAT---
 A C G T A C G T A C G T A C G T A C T G A G T C C G T A C A G T C T G A A C G T A G T C C G T A A C G T
G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T A C G T A C G T A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:2
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---TGCATATCAT
ATATGCAAATNNN
 A C G T A C G T A C G T A C G T A C T G A G T C C G T A C A G T C T G A A C G T A G T C C G T A A C G T
C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A

Pou2f3/MA0627.1/Jaspar

Match Rank:3
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----TGCATATCAT-
TTGTATGCAAATTAGA
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A C A G T C T G A A C G T A G T C C G T A A C G T A C G T
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A

PH0145.1_Pou2f3/Jaspar

Match Rank:4
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----TGCATATCAT-
TTGTATGCAAATTAGA
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A C A G T C T G A A C G T A G T C C G T A A C G T A C G T
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TGCATATCAT
TTATGCAAAT---
 A C G T A C G T A C G T A C G T A C T G A G T C C G T A C A G T C T G A A C G T A G T C C G T A A C G T
C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T

PH0144.1_Pou2f2/Jaspar

Match Rank:6
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----TGCATATCAT-
TTGTATGCAAATTAGA
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A C A G T C T G A A C G T A G T C C G T A A C G T A C G T
A G C T G C A T C A T G G C A T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A C T A G T G C A

PH0148.1_Pou3f3/Jaspar

Match Rank:7
Score:0.64
Offset:-7
Orientation:reverse strand
Alignment:-------TGCATATCAT
TNNATTATGCATANNTT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A C A G T C T G A A C G T A G T C C G T A A C G T
G C A T G C A T G A C T G T C A C G A T C G A T C G T A A G C T C A T G G T A C C T G A C G A T C T G A G C A T G A C T C G A T C G A T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:8
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TGCATATCAT
WATGCAAATGAG
 A C G T A C G T A C G T A C T G A G T C C G T A C A G T C T G A A C G T A G T C C G T A A C G T
G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:9
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TGCATATCAT
ATGMATATDC-
 A C G T A C G T A C T G A G T C C G T A C A G T C T G A A C G T A G T C C G T A A C G T
G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C A C G T

PB0022.1_Gata5_1/Jaspar

Match Rank:10
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TGCATATCAT----
NTNTTCTTATCAGTNTN
 A C G T A C G T A C G T A C G T A C T G A G T C C G T A C A G T C T G A A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T
G C T A G C A T G T A C A G C T A G C T A T G C C G A T C G A T C G T A A C G T A G T C C G T A T C A G G A C T G C A T G C A T C G T A