Information for 7-CGTGMCSTTCTGT (Motif 13)

A G T C C T A G A C G T A T C G G T A C G A T C A T G C C G A T A C G T A G T C A C G T A C T G A C G T
Reverse Opposite:
C G T A A G T C C G T A A C T G C G T A C G T A T A C G C T A G C A T G A T G C G T C A A G T C T C A G
p-value:1e-10
log p-value:-2.322e+01
Information Content per bp:1.774
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif2.67%
Number of Background Sequences with motif22.8
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets38.0 +/- 18.0bp
Average Position of motif in Background64.1 +/- 25.5bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:1
Score:0.66
Offset:4
Orientation:forward strand
Alignment:CGTGMCSTTCTGT-
----ACCATCTGTT
 A G T C C T A G A C G T A T C G G T A C G A T C A T G C C G A T A C G T A G T C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:2
Score:0.63
Offset:4
Orientation:forward strand
Alignment:CGTGMCSTTCTGT-
----GCCATCTGTT
 A G T C C T A G A C G T A T C G G T A C G A T C A T G C C G A T A C G T A G T C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:3
Score:0.62
Offset:4
Orientation:forward strand
Alignment:CGTGMCSTTCTGT-
----RCCATMTGTT
 A G T C C T A G A C G T A T C G G T A C G A T C A T G C C G A T A C G T A G T C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T C T G A T G A C T G A C C G T A A C G T T G A C A G C T C T A G A C G T G A C T

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.62
Offset:8
Orientation:forward strand
Alignment:CGTGMCSTTCTGT-
--------GCTGTG
 A G T C C T A G A C G T A T C G G T A C G A T C A T G C C G A T A C G T A G T C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G

PB0207.1_Zic3_2/Jaspar

Match Rank:5
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CGTGMCSTTCTGT----
--NNTCCTGCTGTGNNN
 A G T C C T A G A C G T A T C G G T A C G A T C A T G C C G A T A C G T A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:CGTGMCSTTCTGT-
----ACTTCCTGTT
 A G T C C T A G A C G T A T C G G T A C G A T C A T G C C G A T A C G T A G T C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T T C G A A G T C C G A T C G A T A G T C A G T C A C G T T A C G G A C T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:7
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CGTGMCSTTCTGT----
--TNTCCTGCTGTGNNG
 A G T C C T A G A C G T A T C G G T A C G A T C A T G C C G A T A C G T A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CGTGMCSTTCTGT-
--CCCCCTGCTGTG
 A G T C C T A G A C G T A T C G G T A C G A T C A T G C C G A T A C G T A G T C A C G T A C T G A C G T A C G T
A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

PB0206.1_Zic2_2/Jaspar

Match Rank:9
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CGTGMCSTTCTGT----
--TCNCCTGCTGNGNNN
 A G T C C T A G A C G T A T C G G T A C G A T C A T G C C G A T A C G T A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

TAL1::TCF3/MA0091.1/Jaspar

Match Rank:10
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CGTGMCSTTCTGT-
--CGACCATCTGTT
 A G T C C T A G A C G T A T C G G T A C G A T C A T G C C G A T A C G T A G T C A C G T A C T G A C G T A C G T
A C G T A C G T G T A C T A C G C T G A G T A C A T G C C G T A A C G T G T A C A C G T A C T G A C G T G A C T