Information for 24-GGAAATAAAGACTGTC (Motif 43)

A C T G C T A G C T G A C G T A C T G A A C G T C G T A C G T A C G T A A T C G C G T A A T G C C G A T A C T G A C G T A G T C
Reverse Opposite:
A C T G G T C A T A G C C G T A A T C G A C G T A T G C A C G T A C G T A C G T C G T A A G C T A C G T A G C T A G T C A G T C
p-value:1e-5
log p-value:-1.212e+01
Information Content per bp:1.884
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.40%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets41.0 +/- 19.4bp
Average Position of motif in Background17.8 +/- 2.9bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0005.1_Forkhead_class/Jaspar

Match Rank:1
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:GGAAATAAAGACTGTC
--AAATAAACA-----
 A C T G C T A G C T G A C G T A C T G A A C G T C G T A C G T A C G T A A T C G C G T A A T G C C G A T A C T G A C G T A G T C
A C G T A C G T T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A A C G T A C G T A C G T A C G T A C G T

PB0012.1_Elf3_1/Jaspar

Match Rank:2
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----GGAAATAAAGACTGTC
AACAAGGAAGTAA--------
 A C G T A C G T A C G T A C G T A C G T A C T G C T A G C T G A C G T A C T G A A C G T C G T A C G T A C G T A A T C G C G T A A T G C C G A T A C T G A C G T A G T C
C G A T C G T A G T A C T G C A T G C A C T A G C A T G C G T A G C T A T C A G G A C T C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HOXA10/MA0899.1/Jaspar

Match Rank:3
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GGAAATAAAGACTGTC
GGTAATAAAAA-----
 A C T G C T A G C T G A C G T A C T G A A C G T C G T A C G T A C G T A A T C G C G T A A T G C C G A T A C T G A C G T A G T C
C T A G T C A G G A C T T G C A T C G A G C A T C G T A C G T A G T C A G T C A G T C A A C G T A C G T A C G T A C G T A C G T

Foxq1/MA0040.1/Jaspar

Match Rank:4
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:GGAAATAAAGACTGTC
---AATAAACAATN--
 A C T G C T A G C T G A C G T A C T G A A C G T C G T A C G T A C G T A A T C G C G T A A T G C C G A T A C T G A C G T A G T C
A C G T A C G T A C G T G C T A T G C A A G C T C G T A C G T A C G T A A G T C C G T A C G T A A G C T C G T A A C G T A C G T

FOXL1/MA0033.2/Jaspar

Match Rank:5
Score:0.58
Offset:4
Orientation:forward strand
Alignment:GGAAATAAAGACTGTC
----GTAAACA-----
 A C T G C T A G C T G A C G T A C T G A A C G T C G T A C G T A C G T A A T C G C G T A A T G C C G A T A C T G A C G T A G T C
A C G T A C G T A C G T A C G T C T A G G A C T T G C A G T C A T G C A A G T C G T C A A C G T A C G T A C G T A C G T A C G T

PH0013.1_Cdx2/Jaspar

Match Rank:6
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GGAAATAAAGACTGTC
AAAGGTAATAAAATTT---
 A C G T A C G T A C G T A C T G C T A G C T G A C G T A C T G A A C G T C G T A C G T A C G T A A T C G C G T A A T G C C G A T A C T G A C G T A G T C
C G T A T C G A T A C G C T A G T C A G A G C T G T C A C T G A C G A T C G T A C G T A G C T A G C T A G A C T C A G T G A C T A C G T A C G T A C G T

Foxd3/MA0041.1/Jaspar

Match Rank:7
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GGAAATAAAGACTGTC
--AAACAAACATTC--
 A C T G C T A G C T G A C G T A C T G A A C G T C G T A C G T A C G T A A T C G C G T A A T G C C G A T A C T G A C G T A G T C
A C G T A C G T C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C A C G T A C G T

FOXP3/MA0850.1/Jaspar

Match Rank:8
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GGAAATAAAGACTGTC
----GTAAACA-----
 A C T G C T A G C T G A C G T A C T G A A C G T C G T A C G T A C G T A A T C G C G T A A T G C C G A T A C T G A C G T A G T C
A C G T A C G T A C G T A C G T C T A G G A C T C G T A C T G A T C G A A G T C C T G A A C G T A C G T A C G T A C G T A C G T

Hoxd9/MA0913.1/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GGAAATAAAGACTGTC
-GCAATAAAAA-----
 A C T G C T A G C T G A C G T A C T G A A C G T C G T A C G T A C G T A A T C G C G T A A T G C C G A T A C T G A C G T A G T C
A C G T T C A G G A T C T G C A C T G A C G A T G C T A G C T A G C T A C G T A G C T A A C G T A C G T A C G T A C G T A C G T

CDX2/MA0465.1/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GGAAATAAAGACTGTC
AAGCCATAAAA------
 A C G T A C T G C T A G C T G A C G T A C T G A A C G T C G T A C G T A C G T A A T C G C G T A A T G C C G A T A C T G A C G T A G T C
T C G A C T G A T C A G A G T C G T A C C G T A A C G T C G T A C G T A C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T