Information for 25-AAACGATGGAACA (Motif 42)

C G T A C G T A C G T A A G T C A C T G C G T A A C G T A C T G A C T G C G T A C G T A A G T C C G T A
Reverse Opposite:
A C G T A C T G A C G T A C G T A G T C A G T C C G T A A C G T A G T C A C T G A C G T A C G T A C G T
p-value:1e-5
log p-value:-1.212e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.40%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets41.0 +/- 31.4bp
Average Position of motif in Background43.0 +/- 8.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0044.1_Homez/Jaspar

Match Rank:1
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----AAACGATGGAACA
NNTAAAAACGATGTTNT-
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A A G T C A C T G C G T A A C G T A C T G A C T G C G T A C G T A A G T C C G T A
G A T C G A C T C G A T T C G A C G T A C G T A G C T A G C T A A G T C C A T G C G T A C G A T A C T G C G A T C G A T C G A T G C A T A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:2
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-AAACGATGGAACA
VRAACAATGG----
 A C G T C G T A C G T A C G T A A G T C A C T G C G T A A C G T A C T G A C T G C G T A C G T A A G T C C G T A
T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G A C G T A C G T A C G T A C G T

SOX9/MA0077.1/Jaspar

Match Rank:3
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AAACGATGGAACA
GAACAATGG----
 C G T A C G T A C G T A A G T C A C T G C G T A A C G T A C T G A C T G C G T A C G T A A G T C C G T A
C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G A C G T A C G T A C G T A C G T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.61
Offset:6
Orientation:forward strand
Alignment:AAACGATGGAACA---
------TGGAACAGMA
 C G T A C G T A C G T A A G T C A C T G C G T A A C G T A C T G A C T G C G T A C G T A A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A

NFATC2/MA0152.1/Jaspar

Match Rank:5
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:AAACGATGGAACA
------TGGAAAA
 C G T A C G T A C G T A A G T C A C T G C G T A A C G T A C T G A C T G C G T A C G T A A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AAACGATGGAACA
GAACAATGGN---
 C G T A C G T A C G T A A G T C A C T G C G T A A C G T A C T G A C T G C G T A C G T A A G T C C G T A
C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G A C G T A C G T A C G T

PB0066.1_Sox17_1/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AAACGATGGAACA
ATAAACAATTAAACA
 A C G T A C G T C G T A C G T A C G T A A G T C A C T G C G T A A C G T A C T G A C T G C G T A C G T A A G T C C G T A
T G C A C G A T C T G A C G T A C G T A A G T C C G T A C G T A C G A T C G A T T C G A G C T A G C A T G A T C C G T A

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:8
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AAACGATGGAACA
RAACAATGGN---
 C G T A C G T A C G T A A G T C A C T G C G T A A C G T A C T G A C T G C G T A C G T A A G T C C G T A
C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:9
Score:0.59
Offset:4
Orientation:forward strand
Alignment:AAACGATGGAACA-
----CCAGGAACAG
 C G T A C G T A C G T A A G T C A C T G C G T A A C G T A C T G A C T G C G T A C G T A A G T C C G T A A C G T
A C G T A C G T A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:10
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:AAACGATGGAACA-
----AATGGAAAAT
 C G T A C G T A C G T A A G T C A C T G C G T A A C G T A C T G A C T G C G T A C G T A A G T C C G T A A C G T
A C G T A C G T A C G T A C G T T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T