Information for 17-GGTAGGTGTC (Motif 41)

A C T G A C T G A C G T C G T A A C T G A C T G A C G T A C T G A C G T A G T C
Reverse Opposite:
A C T G C G T A A G T C C G T A A G T C A G T C A C G T C G T A A G T C A G T C
p-value:1e-5
log p-value:-1.212e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.40%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets35.3 +/- 24.0bp
Average Position of motif in Background76.7 +/- 2.3bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0117.1_Eomes_2/Jaspar

Match Rank:1
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-GGTAGGTGTC-----
GCGGAGGTGTCGCCTC
 A C G T A C T G A C T G A C G T C G T A A C T G A C T G A C G T A C T G A C G T A G T C A C G T A C G T A C G T A C G T A C G T
T A C G A T C G T C A G C T A G C T G A T A C G A T C G A G C T T C A G C G A T G A T C A C T G T A G C A G T C A G C T T A G C

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:2
Score:0.74
Offset:3
Orientation:forward strand
Alignment:GGTAGGTGTC-
---AGGTGTCA
 A C T G A C T G A C G T C G T A A C T G A C T G A C G T A C T G A C G T A G T C A C G T
A C G T A C G T A C G T C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A

PH0164.1_Six4/Jaspar

Match Rank:3
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-GGTAGGTGTC------
TNNNNGGTGTCATNTNT
 A C G T A C T G A C T G A C G T C G T A A C T G A C T G A C G T A C T G A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A G C T T C A G T C G A C A G T C T G A T C A G A C T G A C G T C T A G A C G T G T A C C T G A C G A T C A G T G A C T G T C A C A G T

TBX5/MA0807.1/Jaspar

Match Rank:4
Score:0.70
Offset:3
Orientation:forward strand
Alignment:GGTAGGTGTC-
---AGGTGTGA
 A C T G A C T G A C G T C G T A A C T G A C T G A C G T A C T G A C G T A G T C A C G T
A C G T A C G T A C G T C T G A T C A G A C T G A C G T C T A G A G C T A C T G C T G A

TBX4/MA0806.1/Jaspar

Match Rank:5
Score:0.68
Offset:3
Orientation:forward strand
Alignment:GGTAGGTGTC-
---AGGTGTGA
 A C T G A C T G A C G T C G T A A C T G A C T G A C G T A C T G A C G T A G T C A C G T
A C G T A C G T A C G T C T G A T C A G T A C G A G C T A C T G G A C T A C T G C T G A

ID4/MA0824.1/Jaspar

Match Rank:6
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GGTAGGTGTC
GACAGGTGTN
 A C T G A C T G A C G T C G T A A C T G A C T G A C G T A C T G A C G T A G T C
C T A G T C G A A G T C C G T A A T C G A T C G A G C T A C T G A G C T G T C A

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:7
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GGTAGGTGTC-
SDGCAGGTGCNS
 A C G T A C T G A C T G A C G T C G T A A C T G A C T G A C G T A C T G A C G T A G T C A C G T
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

TBX2/MA0688.1/Jaspar

Match Rank:8
Score:0.65
Offset:2
Orientation:forward strand
Alignment:GGTAGGTGTC---
--AAGGTGTGAAA
 A C T G A C T G A C G T C G T A A C T G A C T G A C G T A C T G A C G T A G T C A C G T A C G T A C G T
A C G T A C G T C G T A C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A C G T A C G T A

PKNOX2/MA0783.1/Jaspar

Match Rank:9
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GGTAGGTGTC-
TGACAGGTGTCA
 A C G T A C T G A C T G A C G T C G T A A C T G A C T G A C G T A C T G A C G T A G T C A C G T
C G A T T A C G C T G A A G T C C G T A C A T G T A C G A G C T T C A G G A C T T G A C C T G A

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GGTAGGTGTC
CAGGTAAGTAT-
 A C G T A C G T A C T G A C T G A C G T C G T A A C T G A C T G A C G T A C T G A C G T A G T C
T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T A C G T