Information for 22-GCCAACAGATACC (Motif 31)

A C T G A G T C A G T C C G T A C G T A A T G C C G T A C T A G C G T A A C G T C G T A A G T C A G T C
Reverse Opposite:
A C T G A C T G A C G T C G T A A C G T A G T C A C G T A T C G C G A T A C G T A C T G A C T G G T A C
p-value:1e-8
log p-value:-1.971e+01
Information Content per bp:1.933
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets59.0 +/- 29.3bp
Average Position of motif in Background16.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC/MA0161.1/Jaspar

Match Rank:1
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GCCAACAGATACC
TGCCAA--------
 A C G T A C T G A G T C A G T C C G T A C G T A A T G C C G T A C T A G C G T A A C G T C G T A A G T C A G T C
G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:2
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GCCAACAGATACC
CGTGCCAAG-------
 A C G T A C G T A C G T A C T G A G T C A G T C C G T A C G T A A T G C C G T A C T A G C G T A A C G T C G T A A G T C A G T C
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GCCAACAGATACC--
TGCCAAAATAAACANN
 A C G T A C T G A G T C A G T C C G T A C G T A A T G C C G T A C T A G C G T A A C G T C G T A A G T C A G T C A C G T A C G T
C G A T A C T G T A G C G T A C C G T A C T G A C T G A C T G A G A C T G T C A G T C A C T G A A G T C C G T A C T G A G C T A

NFIA/MA0670.1/Jaspar

Match Rank:4
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GCCAACAGATACC
GGTGCCAAGT------
 A C G T A C G T A C G T A C T G A G T C A G T C C G T A C G T A A T G C C G T A C T A G C G T A A C G T C G T A A G T C A G T C
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T A C G T A C G T A C G T A C G T

PH0161.1_Six1/Jaspar

Match Rank:5
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GCCAACAGATACC-----
-ANNNATGATACCCCATC
 A C T G A G T C A G T C C G T A C G T A A T G C C G T A C T A G C G T A A C G T C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T G T C A T G C A C G T A G T C A C T G A G A C T C A T G C G T A A G C T G T C A A G T C A T G C A G T C A G T C G C T A C G A T G A T C

Hic1/MA0739.1/Jaspar

Match Rank:6
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GCCAACAGATACC
ATGCCAACC------
 A C G T A C G T A C T G A G T C A G T C C G T A C G T A A T G C C G T A C T A G C G T A A C G T C G T A A G T C A G T C
T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T

PH0162.1_Six2/Jaspar

Match Rank:7
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GCCAACAGATACC-----
-ANANGTGATACCCCATT
 A C T G A G T C A G T C C G T A C G T A A T G C C G T A C T A G C G T A A C G T C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T G T C A C T G A C G T A G T A C C T A G A G C T C A T G C G T A A G C T G T C A A G T C T G A C A G T C A G T C G T C A C G A T G A C T

PB0126.1_Gata5_2/Jaspar

Match Rank:8
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GCCAACAGATACC-----
-GACAGAGATATCAGTGT
 A C T G A G T C A G T C C G T A C G T A A T G C C G T A C T A G C G T A A C G T C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T T C A G T G C A A G T C G T C A C T A G G T C A C A T G T C G A C A G T G T C A C A G T G A T C C G T A C T A G G A C T A C G T A C G T

PB0059.1_Six6_1/Jaspar

Match Rank:9
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GCCAACAGATACC-----
-ANANNTGATACCCNATN
 A C T G A G T C A G T C C G T A C G T A A T G C C G T A C T A G C G T A A C G T C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T C T G A C G A T C G T A G C A T C T G A G A C T C T A G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A C T

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:10
Score:0.54
Offset:6
Orientation:forward strand
Alignment:GCCAACAGATACC-
------AGATAASR
 A C T G A G T C A G T C C G T A C G T A A T G C C G T A C T A G C G T A A C G T C G T A A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C T A A T C G G C T A G A C T G C T A T C G A T A G C T C G A