Information for 20-STGGCCTGGTGGCYGG (Motif 29)

A T C G A C G T A C T G A C T G A T G C A G T C C G A T A C T G A T C G A C G T A T C G A C T G A G T C G A T C C T A G A C T G
Reverse Opposite:
T G A C A G T C C T A G A C T G T A G C A T G C C G T A A T G C G T A C C G T A A C T G A T C G A G T C A G T C G T C A T A G C
p-value:1e-8
log p-value:-1.978e+01
Information Content per bp:1.745
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif7.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets40.2 +/- 22.3bp
Average Position of motif in Background35.6 +/- 34.3bp
Strand Bias (log2 ratio + to - strand density)2.8
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:1
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:STGGCCTGGTGGCYGG
TTGGCATGGTGCCA--
 A T C G A C G T A C T G A C T G A T G C A G T C C G A T A C T G A T C G A C G T A T C G A C T G A G T C G A T C C T A G A C T G
G A C T A C G T A C T G A C T G A G T C C G T A G A C T A T C G A T C G C A G T A C T G A G T C A G T C C G T A A C G T A C G T

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:STGGCCTGGTGGCYGG
TTGGCANNNTGCCAAG
 A T C G A C G T A C T G A C T G A T G C A G T C C G A T A C T G A T C G A C G T A T C G A C T G A G T C G A T C C T A G A C T G
G A C T C A G T A C T G C T A G T G A C G C T A T A G C C G T A T A C G C G A T A C T G G A T C G T A C G T C A C T G A T C A G

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:STGGCCTGGTGGCYGG
-AGGCCTAG-------
 A T C G A C G T A C T G A C T G A T G C A G T C C G A T A C T G A T C G A C G T A T C G A C T G A G T C G A T C C T A G A C T G
A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.57
Offset:1
Orientation:forward strand
Alignment:STGGCCTGGTGGCYGG
-AGGCCTNG-------
 A T C G A C G T A C T G A C T G A T G C A G T C C G A T A C T G A T C G A C G T A T C G A C T G A G T C G A T C C T A G A C T G
A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:5
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:STGGCCTGGTGGCYGG
--SDGCAGGTGCNS--
 A T C G A C G T A C T G A C T G A T G C A G T C C G A T A C T G A T C G A C G T A T C G A C T G A G T C G A T C C T A G A C T G
A C G T A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:6
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-STGGCCTGGTGGCYGG
BNTGDCCTTG-------
 A C G T A T C G A C G T A C T G A C T G A T G C A G T C C G A T A C T G A T C G A C G T A T C G A C T G A G T C G A T C C T A G A C T G
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:7
Score:0.55
Offset:-6
Orientation:forward strand
Alignment:------STGGCCTGGTGGCYGG
GGGGCCGAGGCCTG--------
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C G T A C T G A C T G A T G C A G T C C G A T A C T G A T C G A C G T A T C G A C T G A G T C G A T C C T A G A C T G
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:8
Score:0.54
Offset:0
Orientation:forward strand
Alignment:STGGCCTGGTGGCYGG
CTGGCAGNCTGCCA--
 A T C G A C G T A C T G A C T G A T G C A G T C C G A T A C T G A T C G A C G T A T C G A C T G A G T C G A T C C T A G A C T G
A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:STGGCCTGGTGGCYGG
---NNCAGGTGNN---
 A T C G A C G T A C T G A C T G A T G C A G T C C G A T A C T G A T C G A C G T A T C G A C T G A G T C G A T C C T A G A C T G
A C G T A C G T A C G T C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G A C G T A C G T A C G T

PB0200.1_Zfp187_2/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:forward strand
Alignment:STGGCCTGGTGGCYGG
GAGCCCTTGTCCCTAA
 A T C G A C G T A C T G A C T G A T G C A G T C C G A T A C T G A T C G A C G T A T C G A C T G A G T C G A T C C T A G A C T G
A C T G C T G A C T A G G T A C A G T C A G T C G A C T A G C T T C A G G A C T G A T C A G T C G T A C G A C T G C A T T C A G