Information for 19-CCWKWGCMAAKAATTM (Motif 27)

A T G C A G T C C G A T A C T G C G A T A C T G A G T C G T C A C G T A C G T A A C G T C G T A C G T A A C G T A C G T G T C A
Reverse Opposite:
A C G T G T C A C G T A C G A T A C G T G T C A A C G T A C G T A C G T A C T G A G T C C G T A G T A C C G T A C T A G A T C G
p-value:1e-11
log p-value:-2.545e+01
Information Content per bp:1.843
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.4 +/- 26.3bp
Average Position of motif in Background80.0 +/- 0.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0010.1_Homeobox_class/Jaspar

Match Rank:1
Score:0.66
Offset:8
Orientation:forward strand
Alignment:CCWKWGCMAAKAATTM
--------AATAATT-
 A T G C A G T C C G A T A C T G C G A T A C T G A G T C G T C A C G T A C G T A A C G T C G T A C G T A A C G T A C G T G T C A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A C G T A G C A T C T G A C T G A C G A T C G A T A C G T

PH0106.1_Msx1/Jaspar

Match Rank:2
Score:0.63
Offset:4
Orientation:forward strand
Alignment:CCWKWGCMAAKAATTM----
----TGCAACTAATTAATTC
 A T G C A G T C C G A T A C T G C G A T A C T G A G T C G T C A C G T A C G T A A C G T C G T A C G T A A C G T A C G T G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G G T A C G C T A C T G A G A T C G A C T G T C A C G T A C G A T C G A T C T G A C T G A A C G T G C A T G T A C

Hoxd8/MA0910.1/Jaspar

Match Rank:3
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:CCWKWGCMAAKAATTM----
---NAGCCATTAATTANTTA
 A T G C A G T C C G A T A C T G C G A T A C T G A G T C G T C A C G T A C G T A A C G T C G T A C G T A A C G T A C G T G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T G C T A C T A G G A T C G A T C C T G A C G A T G C A T C G T A C G T A C G A T C A G T C T G A G C A T G A C T C G A T G T C A

PH0080.1_Hoxd8/Jaspar

Match Rank:4
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:CCWKWGCMAAKAATTM----
---NAGCCATTAATTANTTA
 A T G C A G T C C G A T A C T G C G A T A C T G A G T C G T C A C G T A C G T A A C G T C G T A C G T A A C G T A C G T G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T G C T A C T A G G A T C G A T C C T G A C G A T G C A T C G T A C G T A C G A T C A G T C T G A G C A T G A C T C G A T G T C A

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:5
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CCWKWGCMAAKAATTM
NNNVCTGWGYAAACASN--
 A C G T A C G T A C G T A T G C A G T C C G A T A C T G C G A T A C T G A G T C G T C A C G T A C G T A A C G T C G T A C G T A A C G T A C G T G T C A
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A A C G T A C G T

PH0028.1_En1/Jaspar

Match Rank:6
Score:0.59
Offset:4
Orientation:forward strand
Alignment:CCWKWGCMAAKAATTM----
----GCGAACTAATTAATGC
 A T G C A G T C C G A T A C T G C G A T A C T G A G T C G T C A C G T A C G T A A C G T C G T A C G T A A C G T A C G T G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C A G T A G C T A C G T G C A T G C A A G T C A G C T C T G A C T G A C G A T A C G T C T G A C T G A A C G T C T A G T A G C

PH0055.1_Hoxa7_2/Jaspar

Match Rank:7
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:CCWKWGCMAAKAATTM----
----TNCCATTAATTACTNC
 A T G C A G T C C G A T A C T G C G A T A C T G A G T C G T C A C G T A C G T A A C G T C G T A C G T A A C G T A C G T G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T A T G C A G T C T G C A A C G T G C A T G T C A C G T A A C G T C A G T C G T A T G A C A C G T T G C A T G A C

PH0008.1_Barx2/Jaspar

Match Rank:8
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:CCWKWGCMAAKAATTM----
----NANAANTAATTANTTA
 A T G C A G T C C G A T A C T G C G A T A C T G A G T C G T C A C G T A C G T A A C G T C G T A C G T A A C G T A C G T G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T C T G A G A C T G T C A T C G A A G T C G A C T G T C A G C T A C A G T C A G T C T G A T G A C A G C T C G A T C G T A

PB0165.1_Sox11_2/Jaspar

Match Rank:9
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CCWKWGCMAAKAATTM-
---NNCNNAACAATTNT
 A T G C A G T C C G A T A C T G C G A T A C T G A G T C G T C A C G T A C G T A A C G T C G T A C G T A A C G T A C G T G T C A A C G T
A C G T A C G T A C G T G C A T G A C T A G T C G T C A C G A T C T G A C G T A A G T C C G T A T C G A A G C T G A C T G A C T G C A T

PH0019.1_Dbx2/Jaspar

Match Rank:10
Score:0.58
Offset:4
Orientation:forward strand
Alignment:CCWKWGCMAAKAATTM----
----TTTAATTAATTAATTC
 A T G C A G T C C G A T A C T G C G A T A C T G A G T C G T C A C G T A C G T A A C G T C G T A C G T A A C G T A C G T G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T G A C T G T C A C G T A G C A T G A C T C G T A C G T A C G A T C A G T C T G A C G T A A C G T G C A T G T A C