Information for 15-AAGTGGACAGGTTKTC (Motif 17)

T C G A C T G A A T C G C G A T C T A G C T A G C G T A A T G C C G T A A C T G A C T G G A C T C G A T A C T G G C A T G A T C
Reverse Opposite:
C A T G C G T A T G A C C G T A C T G A A G T C T G A C C G A T A T C G A C G T A G T C G A T C C G T A A T G C G A C T A C G T
p-value:1e-12
log p-value:-2.980e+01
Information Content per bp:1.720
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.6 +/- 23.5bp
Average Position of motif in Background51.2 +/- 18.2bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0141.1_Pknox2/Jaspar

Match Rank:1
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AAGTGGACAGGTTKTC
NNATTGACAGGTGCTT
 T C G A C T G A A T C G C G A T C T A G C T A G C G T A A T G C C G T A A C T G A C T G G A C T C G A T A C T G G C A T G A T C
T C G A C A G T C G T A C A G T A G C T C T A G C G T A A G T C C T G A C A T G A T C G A G C T T A C G A G T C G A C T C G A T

MEIS2/MA0774.1/Jaspar

Match Rank:2
Score:0.59
Offset:3
Orientation:forward strand
Alignment:AAGTGGACAGGTTKTC
---TTGACAGC-----
 T C G A C T G A A T C G C G A T C T A G C T A G C G T A A T G C C G T A A C T G A C T G G A C T C G A T A C T G G C A T G A T C
A C G T A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T A C G T A C G T A C G T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.59
Offset:5
Orientation:forward strand
Alignment:AAGTGGACAGGTTKTC
-----AACAGGAAGT-
 T C G A C T G A A T C G C G A T C T A G C T A G C G T A A T G C C G T A A C T G A C T G G A C T C G A T A C T G G C A T G A T C
A C G T A C G T A C G T A C G T A C G T T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T A C G T

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:4
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:AAGTGGACAGGTTKTC---
----GVACAGNMTGTYCTB
 T C G A C T G A A T C G C G A T C T A G C T A G C G T A A T G C C G T A A C T G A C T G G A C T C G A T A C T G G C A T G A T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G T C G A C G T A T A G C C G T A C A T G C G T A T G A C G C A T T A C G G A C T A G C T G A T C G A C T A C T G

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:AAGTGGACAGGTTKTC---
----GRACAGWMTGTYCTB
 T C G A C T G A A T C G C G A T C T A G C T A G C G T A A T G C C G T A A C T G A C T G G A C T C G A T A C T G G C A T G A T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G C T G A C T G A T A G C C G T A A T C G C G T A T G C A G A C T T C A G G C A T G A C T G A T C G A C T A C T G

PH0105.1_Meis3/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AAGTGGACAGGTTKTC
GTATTGACAGGTNNTT
 T C G A C T G A A T C G C G A T C T A G C T A G C G T A A T G C C G T A A C T G A C T G G A C T C G A T A C T G G C A T G A T C
C A T G A C G T C G T A C G A T G A C T A C T G C G T A A G T C C T G A C T A G T A C G G A C T T G C A G C T A G A C T G C A T

MEIS3/MA0775.1/Jaspar

Match Rank:7
Score:0.58
Offset:3
Orientation:forward strand
Alignment:AAGTGGACAGGTTKTC
---TTGACAGG-----
 T C G A C T G A A T C G C G A T C T A G C T A G C G T A A T G C C G T A A C T G A C T G G A C T C G A T A C T G G C A T G A T C
A C G T A C G T A C G T C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G A C G T A C G T A C G T A C G T A C G T

GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.58
Offset:2
Orientation:forward strand
Alignment:AAGTGGACAGGTTKTC--
--NAGNACANNNTGTNCT
 T C G A C T G A A T C G C G A T C T A G C T A G C G T A A T G C C G T A A C T G A C T G G A C T C G A T A C T G G C A T G A T C A C G T A C G T
A C G T A C G T T A C G C T G A C T A G T C G A C G T A A G T C C T G A A T C G G C A T T A G C G A C T A C T G A C G T A G C T A G T C G A C T

PH0104.1_Meis2/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AAGTGGACAGGTTKTC
NTATTGACAGGTNNTN
 T C G A C T G A A T C G C G A T C T A G C T A G C G T A A T G C C G T A A C T G A C T G G A C T C G A T A C T G G C A T G A T C
C T A G C A G T G C T A C G A T G A C T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A G C T G C A T C G A T

SNAI2/MA0745.1/Jaspar

Match Rank:10
Score:0.57
Offset:5
Orientation:forward strand
Alignment:AAGTGGACAGGTTKTC
-----AACAGGTGT--
 T C G A C T G A A T C G C G A T C T A G C T A G C G T A A T G C C G T A A C T G A C T G G A C T C G A T A C T G G C A T G A T C
A C G T A C G T A C G T A C G T A C G T C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T A C G T A C G T