Information for 12-CWAVCAAAGCARCATG (Motif 13)

A G T C C G T A C T G A T G A C T A G C G C T A C T G A C T G A T C A G A T G C G T C A C T G A G A T C T G C A A C G T T A C G
Reverse Opposite:
A T G C G T C A A C G T C T A G A G C T A C G T A T C G A G T C A G C T A G C T C G A T A C T G A C G T A G C T C G A T T A C G
p-value:1e-13
log p-value:-3.124e+01
Information Content per bp:1.655
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.43%
Number of Background Sequences with motif90.6
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets37.0 +/- 22.6bp
Average Position of motif in Background49.7 +/- 33.3bp
Strand Bias (log2 ratio + to - strand density)1.1
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0026.1_Duxbl/Jaspar

Match Rank:1
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CWAVCAAAGCARCATG-
CGACCCAATCAACGGTG
 A G T C C G T A C T G A T G A C T A G C G C T A C T G A C T G A T C A G A T G C G T C A C T G A G A T C T G C A A C G T T A C G A C G T
A G T C C T A G C T G A A G T C A G T C A G T C G T C A G T C A A G C T A G T C C G T A C T G A A G T C T A C G T C A G G C A T T A C G

PB0206.1_Zic2_2/Jaspar

Match Rank:2
Score:0.57
Offset:4
Orientation:forward strand
Alignment:CWAVCAAAGCARCATG---
----CCACACAGCAGGAGA
 A G T C C G T A C T G A T G A C T A G C G C T A C T G A C T G A T C A G A T G C G T C A C T G A G A T C T G C A A C G T T A C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0205.1_Zic1_2/Jaspar

Match Rank:3
Score:0.57
Offset:4
Orientation:forward strand
Alignment:CWAVCAAAGCARCATG---
----CCACACAGCAGGAGA
 A G T C C G T A C T G A T G A C T A G C G C T A C T G A C T G A T C A G A T G C G T C A C T G A G A T C T G C A A C G T T A C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0123.1_Foxl1_2/Jaspar

Match Rank:4
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CWAVCAAAGCARCATG
ATATCAAAACAAAACA
 A G T C C G T A C T G A T G A C T A G C G C T A C T G A C T G A T C A G A T G C G T C A C T G A G A T C T G C A A C G T T A C G
G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:5
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:CWAVCAAAGCARCATG
------DCTCAGCAGG
 A G T C C G T A C T G A T G A C T A G C G C T A C T G A C T G A T C A G A T G C G T C A C T G A G A T C T G C A A C G T T A C G
A C G T A C G T A C G T A C G T A C G T A C G T C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G

PB0121.1_Foxj3_2/Jaspar

Match Rank:6
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CWAVCAAAGCARCATG
AACACCAAAACAAAGGA
 A C G T A G T C C G T A C T G A T G A C T A G C G C T A C T G A C T G A T C A G A T G C G T C A C T G A G A T C T G C A A C G T T A C G
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

PB0207.1_Zic3_2/Jaspar

Match Rank:7
Score:0.55
Offset:4
Orientation:forward strand
Alignment:CWAVCAAAGCARCATG---
----GAGCACAGCAGGACA
 A G T C C G T A C T G A T G A C T A G C G C T A C T G A C T G A T C A G A T G C G T C A C T G A G A T C T G C A A C G T T A C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

PB0055.1_Rfx4_1/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CWAVCAAAGCARCATG
-TACCATAGCAACGGT
 A G T C C G T A C T G A T G A C T A G C G C T A C T G A C T G A T C A G A T G C G T C A C T G A G A T C T G C A A C G T T A C G
A C G T A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T

PB0166.1_Sox12_2/Jaspar

Match Rank:9
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---CWAVCAAAGCARCATG
AAACAGACAAAGGAAT---
 A C G T A C G T A C G T A G T C C G T A C T G A T G A C T A G C G C T A C T G A C T G A T C A G A T G C G T C A C T G A G A T C T G C A A C G T T A C G
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T A C G T A C G T A C G T

SCRT2/MA0744.1/Jaspar

Match Rank:10
Score:0.54
Offset:6
Orientation:forward strand
Alignment:CWAVCAAAGCARCATG---
------ATGCAACAGGTGG
 A G T C C G T A C T G A T G A C T A G C G C T A C T G A C T G A T C A G A T G C G T C A C T G A G A T C T G C A A C G T T A C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A G C A T A C T G G T A C T G C A C G T A G T A C G T C A T C A G A T C G G C A T C A T G A T C G