Information for 4-GGGCTGAABCTGCCTG (Motif 4)

A T C G A C T G C T A G A G T C A G C T A T C G C T G A T G C A A C G T A T G C A C G T A C T G A G T C A G T C C G A T A T C G
Reverse Opposite:
A T G C C G T A A C T G A C T G A G T C C G T A A T C G T C G A A C G T A G C T A T G C C T G A A C T G A G T C A G T C A T G C
p-value:1e-10
log p-value:-2.421e+01
Information Content per bp:1.801
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.57%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets38.6 +/- 19.9bp
Average Position of motif in Background19.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:GGGCTGAABCTGCCTG
-----NNACTTGCCTT
 A T C G A C T G C T A G A G T C A G C T A T C G C T G A T G C A A C G T A T G C A C G T A C T G A G T C A G T C C G A T A T C G
A C G T A C G T A C G T A C G T A C G T T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:2
Score:0.51
Offset:2
Orientation:forward strand
Alignment:GGGCTGAABCTGCCTG
--GGGGCCGAGGCCTG
 A T C G A C T G C T A G A G T C A G C T A T C G C T G A T G C A A C G T A T G C A C G T A C T G A G T C A G T C C G A T A T C G
A C G T A C G T A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G

MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer

Match Rank:3
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:GGGCTGAABCTGCCTG
-TGCTGASTCAGC---
 A T C G A C T G C T A G A G T C A G C T A T C G C T G A T G C A A C G T A T G C A C G T A C T G A G T C A G T C C G A T A T C G
A C G T A C G T A T C G T G A C G C A T C A T G C G T A T A G C G A C T G A T C C T G A A T C G A G T C A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.49
Offset:9
Orientation:forward strand
Alignment:GGGCTGAABCTGCCTG-
---------CTGTCTGG
 A T C G A C T G C T A G A G T C A G C T A T C G C T G A T G C A A C G T A T G C A C G T A C T G A G T C A G T C C G A T A T C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G

THAP1/MA0597.1/Jaspar

Match Rank:5
Score:0.49
Offset:9
Orientation:forward strand
Alignment:GGGCTGAABCTGCCTG--
---------CTGCCCGCA
 A T C G A C T G C T A G A G T C A G C T A T C G C T G A T G C A A C G T A T G C A C G T A C T G A G T C A G T C C G A T A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A

POL011.1_XCPE1/Jaspar

Match Rank:6
Score:0.48
Offset:0
Orientation:forward strand
Alignment:GGGCTGAABCTGCCTG
GGGCGGGACC------
 A T C G A C T G C T A G A G T C A G C T A T C G C T G A T G C A A C G T A T G C A C G T A C T G A G T C A G T C C G A T A T C G
A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C A C G T A C G T A C G T A C G T A C G T A C G T

HIC2/MA0738.1/Jaspar

Match Rank:7
Score:0.48
Offset:9
Orientation:forward strand
Alignment:GGGCTGAABCTGCCTG--
---------ATGCCCACC
 A T C G A C T G C T A G A G T C A G C T A T C G C T G A T G C A A C G T A T G C A C G T A C T G A G T C A G T C C G A T A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:8
Score:0.48
Offset:10
Orientation:reverse strand
Alignment:GGGCTGAABCTGCCTG-----
----------TGCCTGAGGCN
 A T C G A C T G C T A G A G T C A G C T A T C G C T G A T G C A A C G T A T G C A C G T A C T G A G T C A G T C C G A T A T C G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:9
Score:0.48
Offset:7
Orientation:reverse strand
Alignment:GGGCTGAABCTGCCTG-
-------CACTTCCTGT
 A T C G A C T G C T A G A G T C A G C T A T C G C T G A T G C A A C G T A T G C A C G T A C T G A G T C A G T C C G A T A T C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C T C G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A G C T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:10
Score:0.47
Offset:9
Orientation:reverse strand
Alignment:GGGCTGAABCTGCCTG---
---------TTGCGTGCVA
 A T C G A C T G C T A G A G T C A G C T A T C G C T G A T G C A A C G T A T G C A C G T A C T G A G T C A G T C C G A T A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A