Information for 11-CAGTGATCAGGAC (Motif 21)

A G T C C G T A A C T G A G C T A T C G C G T A C G A T A G T C C G T A A C T G A C T G C G T A A T G C
Reverse Opposite:
A T C G C G A T A G T C G T A C A C G T A C T G C G T A A C G T A T G C C T G A A G T C A C G T A C T G
p-value:1e-5
log p-value:-1.371e+01
Information Content per bp:1.842
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.57%
Number of Background Sequences with motif14.6
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets44.6 +/- 30.0bp
Average Position of motif in Background49.2 +/- 10.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CAGTGATCAGGAC
TCAGNGAGCGTGAC
 A C G T A G T C C G T A A C T G A G C T A T C G C G T A C G A T A G T C C G T A A C T G A C T G C G T A A T G C
A C G T T A G C T C G A A T C G T A C G T C A G C T G A A T C G A G T C C T A G G A C T C T A G C T G A T G A C

Foxo1/MA0480.1/Jaspar

Match Rank:2
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CAGTGATCAGGAC
-TGTAAACAGGA-
 A G T C C G T A A C T G A G C T A T C G C G T A C G A T A G T C C G T A A C T G A C T G C G T A A T G C
A C G T C G A T C T A G C G A T G T C A C G T A C G T A A G T C C G T A T C A G T A C G G T C A A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:3
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CAGTGATCAGGAC
CGAACAGTGCTCACTAT
 A C G T A C G T A C G T A C G T A G T C C G T A A C T G A G C T A T C G C G T A C G A T A G T C C G T A A C T G A C T G C G T A A T G C
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T

PH0017.1_Cux1_2/Jaspar

Match Rank:4
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CAGTGATCAGGAC--
TAGTGATCATCATTA
 A G T C C G T A A C T G A G C T A T C G C G T A C G A T A G T C C G T A A C T G A C T G C G T A A T G C A C G T A C G T
G A C T G C T A C A T G A G C T C A T G G C T A C G A T G A T C C G T A C A G T G A T C T C G A A G C T A C G T G C T A

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:5
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CAGTGATCAGGAC
TATGTAAACANG--
 A C G T A G T C C G T A A C T G A G C T A T C G C G T A C G A T A G T C C G T A A C T G A C T G C G T A A T G C
G C A T T C G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C T G A T A C G A C G T A C G T

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer

Match Rank:6
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CAGTGATCAGGAC
--GTAAACAG---
 A G T C C G T A A C T G A G C T A T C G C G T A C G A T A G T C C G T A A C T G A C T G C G T A A T G C
A C G T A C G T C T A G C A G T G T C A C G T A C T G A A G T C C G T A T A C G A C G T A C G T A C G T

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:7
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CAGTGATCAGGAC
TCATCAATCA----
 A C G T A G T C C G T A A C T G A G C T A T C G C G T A C G A T A G T C C G T A A C T G A C T G C G T A A T G C
G A C T G T A C T G C A A C G T G A T C G C T A T C G A A C G T A G T C C G T A A C G T A C G T A C G T A C G T

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:8
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CAGTGATCAGGAC
GYCATCMATCAT---
 A C G T A C G T A G T C C G T A A C T G A G C T A T C G C G T A C G A T A G T C C G T A A C T G A C T G C G T A A T G C
T A C G G A C T T G A C C G T A A C G T G A T C G T C A C G T A A C G T A T G C C G T A G A C T A C G T A C G T A C G T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:9
Score:0.55
Offset:-7
Orientation:reverse strand
Alignment:-------CAGTGATCAGGAC
NNNNTGCCAGTGATTG----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A G C T A T C G C G T A C G A T A G T C C G T A A C T G A C T G C G T A A T G C
G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G A C G T A C G T A C G T A C G T

FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer

Match Rank:10
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CAGTGATCAGGAC
NDGTAAACARRN-
 A G T C C G T A A C T G A G C T A T C G C G T A C G A T A G T C C G T A A C T G A C T G C G T A A T G C
G C A T C T A G T C A G A C G T C G T A C G T A C G T A A G T C C G T A T C A G T C A G C T G A A C G T