Information for 3-AGGCCTGCCWCGTCAT (Motif 4)

C G T A A C T G A C T G A G T C A G T C A C G T A C T G A G T C A G T C C G A T A G T C T C A G A G C T G T A C C G T A G A C T
Reverse Opposite:
C G T A A C G T C A T G C T G A A G T C A C T G C G A T A C T G T C A G T A G C C G T A A C T G A C T G A G T C A G T C A C G T
p-value:1e-10
log p-value:-2.491e+01
Information Content per bp:1.781
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.57%
Number of Background Sequences with motif6.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets39.2 +/- 24.9bp
Average Position of motif in Background30.0 +/- 16.3bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.73
Offset:0
Orientation:forward strand
Alignment:AGGCCTGCCWCGTCAT
AGGCCTNG--------
 C G T A A C T G A C T G A G T C A G T C A C G T A C T G A G T C A G T C C G A T A G T C T C A G A G C T G T A C C G T A G A C T
C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--AGGCCTGCCWCGTCAT
CTAGGCCT----------
 A C G T A C G T C G T A A C T G A C T G A G T C A G T C A C G T A C T G A G T C A G T C C G A T A G T C T C A G A G C T G T A C C G T A G A C T
T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:3
Score:0.64
Offset:-7
Orientation:forward strand
Alignment:-------AGGCCTGCCWCGTCAT
GGGGCCGAGGCCTG---------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C T G A G T C A G T C A C G T A C T G A G T C A G T C C G A T A G T C T C A G A G C T G T A C C G T A G A C T
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0180.1_Sp4_2/Jaspar

Match Rank:4
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---AGGCCTGCCWCGTCAT
CAAAGGCGTGGCCAG----
 A C G T A C G T A C G T C G T A A C T G A C T G A G T C A G T C A C G T A C T G A G T C A G T C C G A T A G T C T C A G A G C T G T A C C G T A G A C T
A G T C C G T A C G T A T C G A A T C G A C T G G T A C A C T G A C G T C T A G A C T G G A T C G A T C G T C A C A T G A C G T A C G T A C G T A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:5
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AGGCCTGCCWCGTCAT
-TGCCTGCGYCMCCTT
 C G T A A C T G A C T G A G T C A G T C A C G T A C T G A G T C A G T C C G A T A G T C T C A G A G C T G T A C C G T A G A C T
A C G T C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T

CREB3/MA0638.1/Jaspar

Match Rank:6
Score:0.57
Offset:4
Orientation:forward strand
Alignment:AGGCCTGCCWCGTCAT--
----GTGCCACGTCATCA
 C G T A A C T G A C T G A G T C A G T C A C G T A C T G A G T C A G T C C G A T A G T C T C A G A G C T G T A C C G T A G A C T A C G T A C G T
A C G T A C G T A C G T A C G T T C A G A G C T C A T G G T A C A T G C C G T A A G T C C T A G G A C T T G A C C T G A A G C T G T A C T C G A

CREB3L1/MA0839.1/Jaspar

Match Rank:7
Score:0.57
Offset:4
Orientation:forward strand
Alignment:AGGCCTGCCWCGTCAT--
----ATGCCACGTCATCA
 C G T A A C T G A C T G A G T C A G T C A C G T A C T G A G T C A G T C C G A T A G T C T C A G A G C T G T A C C G T A G A C T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A G A C T C T A G G T A C G A T C C T G A A T G C T C A G C G A T T G A C C T G A A G C T G A T C C T G A

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:AGGCCTGCCWCGTCAT
-TGTCTGDCACCT---
 C G T A A C T G A C T G A G T C A G T C A C G T A C T G A G T C A G T C C G A T A G T C T C A G A G C T G T A C C G T A G A C T
A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T A C G T A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:9
Score:0.54
Offset:0
Orientation:forward strand
Alignment:AGGCCTGCCWCGTCAT
CTGTCTGTCACCT---
 C G T A A C T G A C T G A G T C A G T C A C G T A C T G A G T C A G T C C G A T A G T C T C A G A G C T G T A C C G T A G A C T
T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T A C G T A C G T A C G T

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:AGGCCTGCCWCGTCAT
KGCCCTTCCCCA----
 C G T A A C T G A C T G A G T C A G T C A C G T A C T G A G T C A G T C C G A T A G T C T C A G A G C T G T A C C G T A G A C T
C A G T C A T G G A T C G A T C G A T C G A C T A G C T T G A C G A T C G A T C G A T C C T G A A C G T A C G T A C G T A C G T