Information for 4-GCCACGGAGTCTAATG (Motif 6)

A C T G A T G C A G T C G T C A A T G C A C T G A C T G G T C A A C T G A C G T A G T C C A G T C G T A C T G A A C G T A C T G
Reverse Opposite:
A G T C G T C A A G C T A C G T G T C A A C T G T C G A A G T C A C G T A G T C A G T C A T C G A C G T A C T G A T C G A G T C
p-value:1e-13
log p-value:-3.124e+01
Information Content per bp:1.895
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.0 +/- 28.5bp
Average Position of motif in Background78.0 +/- 4.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0203.1_Zfp691_2/Jaspar

Match Rank:1
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GCCACGGAGTCTAATG
NTNNNAGGAGTCTCNTN
 A C G T A C T G A T G C A G T C G T C A A T G C A C T G A C T G G T C A A C T G A C G T A G T C C A G T C G T A C T G A A C G T A C T G
A T C G C A G T A C G T G C T A C T A G C T G A A C T G A C T G C G T A A T C G A G C T G T A C G C A T T G A C T A C G G A C T G T C A

PB0030.1_Hnf4a_1/Jaspar

Match Rank:2
Score:0.50
Offset:0
Orientation:forward strand
Alignment:GCCACGGAGTCTAATG-
CTCCAGGGGTCAATTGA
 A C T G A T G C A G T C G T C A A T G C A C T G A C T G G T C A A C T G A C G T A G T C C A G T C G T A C T G A A C G T A C T G A C G T
A T G C C A G T A G C T T G A C G T C A T C A G C T A G A C T G A C T G A C G T A G T C T G C A G T C A A G C T G C A T C A T G T G C A

CREB3L1/MA0839.1/Jaspar

Match Rank:3
Score:0.48
Offset:-2
Orientation:forward strand
Alignment:--GCCACGGAGTCTAATG
ATGCCACGTCATCA----
 A C G T A C G T A C T G A T G C A G T C G T C A A T G C A C T G A C T G G T C A A C T G A C G T A G T C C A G T C G T A C T G A A C G T A C T G
T C G A G A C T C T A G G T A C G A T C C T G A A T G C T C A G C G A T T G A C C T G A A G C T G A T C C T G A A C G T A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:4
Score:0.47
Offset:4
Orientation:reverse strand
Alignment:GCCACGGAGTCTAATG
----CGGAGC------
 A C T G A T G C A G T C G T C A A T G C A C T G A C T G G T C A A C T G A C G T A G T C C A G T C G T A C T G A A C G T A C T G
A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T

HOXB3/MA0903.1/Jaspar

Match Rank:5
Score:0.47
Offset:9
Orientation:reverse strand
Alignment:GCCACGGAGTCTAATG---
---------NNTAATTANN
 A C T G A T G C A G T C G T C A A T G C A C T G A C T G G T C A A C T G A C G T A G T C C A G T C G T A C T G A A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G A T C T G A C T G A A G C T A C G T C T G A A T C G G A C T

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:6
Score:0.47
Offset:3
Orientation:forward strand
Alignment:GCCACGGAGTCTAATG--
---ACCGTGACTAATTNN
 A C T G A T G C A G T C G T C A A T G C A C T G A C T G G T C A A C T G A C G T A G T C C A G T C G T A C T G A A C G T A C T G A C G T A C G T
A C G T A C G T A C G T C G T A T A G C A G T C C T A G C A G T C T A G C T G A G T A C G C A T T C G A C G T A G C A T A G C T C T A G T C G A

BARX1/MA0875.1/Jaspar

Match Rank:7
Score:0.46
Offset:10
Orientation:reverse strand
Alignment:GCCACGGAGTCTAATG--
----------NTAATTGN
 A C T G A T G C A G T C G T C A A T G C A C T G A C T G G T C A A C T G A C G T A G T C C A G T C G T A C T G A A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T C G T A C G T A A C G T A C G T C T A G A G T C

Rfx1/MA0509.1/Jaspar

Match Rank:8
Score:0.46
Offset:-3
Orientation:reverse strand
Alignment:---GCCACGGAGTCTAATG
GTTGCCATGGNAAC-----
 A C G T A C G T A C G T A C T G A T G C A G T C G T C A A T G C A C T G A C T G G T C A A C T G A C G T A G T C C A G T C G T A C T G A A C G T A C T G
A C T G A G C T G A C T C A T G A G T C A G T C C G T A C G A T C T A G T C A G T G A C C T G A T G C A G A T C A C G T A C G T A C G T A C G T A C G T

PDX1/MA0132.2/Jaspar

Match Rank:9
Score:0.46
Offset:10
Orientation:reverse strand
Alignment:GCCACGGAGTCTAATG--
----------CTAATTAN
 A C T G A T G C A G T C G T C A A T G C A C T G A C T G G T C A A C T G A C G T A G T C C A G T C G T A C T G A A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T C G T A C G T A A C G T A C G T C T G A A T G C

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:10
Score:0.46
Offset:10
Orientation:forward strand
Alignment:GCCACGGAGTCTAATG--
----------CTAATKGV
 A C T G A T G C A G T C G T C A A T G C A C T G A C T G G T C A A C T G A C G T A G T C C A G T C G T A C T G A A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T C T G A C G T A A C G T C A G T T C A G T G A C