Information for 24-GCGAGGCTCTVTGAAG (Motif 48)

A T C G A G T C A C T G G T C A C T A G A C T G A G T C A G C T A G T C A C G T T C G A A C G T C T A G C T G A C G T A A C T G
Reverse Opposite:
A G T C A C G T A G C T A G T C C G T A A C G T C G T A C T A G C T G A A C T G A G T C A G T C A C G T G T A C C T A G A T G C
p-value:1e-6
log p-value:-1.412e+01
Information Content per bp:1.794
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.38%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets62.7 +/- 20.0bp
Average Position of motif in Background10.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TATA-Box(TBP)/Promoter/Homer

Match Rank:1
Score:0.49
Offset:6
Orientation:forward strand
Alignment:GCGAGGCTCTVTGAAG--
------CCTTTTATAGNC
 A T C G A G T C A C T G G T C A C T A G A C T G A G T C A G C T A G T C A C G T T C G A A C G T C T A G C T G A C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A T C G A C T A G C T C G A T C G A T G T C A C G A T T C G A A T C G T A G C T A G C

MEF2B/MA0660.1/Jaspar

Match Rank:2
Score:0.48
Offset:5
Orientation:reverse strand
Alignment:GCGAGGCTCTVTGAAG-
-----GCTATTTATAGC
 A T C G A G T C A C T G G T C A C T A G A C T G A G T C A G C T A G T C A C G T T C G A A C G T C T A G C T G A C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T C A T G A G T C C A G T C G T A C G A T C G A T G C A T C G T A C G A T C T G A C A T G G A T C

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.47
Offset:4
Orientation:reverse strand
Alignment:GCGAGGCTCTVTGAAG
----NGCTN-------
 A T C G A G T C A C T G G T C A C T A G A C T G A G T C A G C T A G T C A C G T T C G A A C G T C T A G C T G A C G T A A C T G
A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:4
Score:0.47
Offset:6
Orientation:forward strand
Alignment:GCGAGGCTCTVTGAAG
------CTTTGT----
 A T C G A G T C A C T G G T C A C T A G A C T G A G T C A G C T A G T C A C G T T C G A A C G T C T A G C T G A C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T

MEF2D/MA0773.1/Jaspar

Match Rank:5
Score:0.46
Offset:5
Orientation:reverse strand
Alignment:GCGAGGCTCTVTGAAG-
-----TCTATTTATAGN
 A T C G A G T C A C T G G T C A C T A G A C T G A G T C A G C T A G T C A C G T T C G A A C G T C T A G C T G A C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T C A G T A G T C A G C T C G T A C G A T G C A T C G A T G C T A C A G T C T G A C T A G G A C T

POL008.1_DCE_S_I/Jaspar

Match Rank:6
Score:0.46
Offset:1
Orientation:reverse strand
Alignment:GCGAGGCTCTVTGAAG
-NGAAGC---------
 A T C G A G T C A C T G G T C A C T A G A C T G A G T C A G C T A G T C A C G T T C G A A C G T C T A G C T G A C G T A A C T G
A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PLAG1/MA0163.1/Jaspar

Match Rank:7
Score:0.46
Offset:2
Orientation:forward strand
Alignment:GCGAGGCTCTVTGAAG
--GGGGCCCAAGGGGG
 A T C G A G T C A C T G G T C A C T A G A C T G A G T C A G C T A G T C A C G T T C G A A C G T C T A G C T G A C G T A A C T G
A C G T A C G T A C T G C T A G A C T G A C T G A T G C A G T C G T A C C G T A T G C A C A T G A C T G A C T G A C T G C T A G

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:8
Score:0.45
Offset:7
Orientation:reverse strand
Alignment:GCGAGGCTCTVTGAAG-
-------CCTTTGAWGT
 A T C G A G T C A C T G G T C A C T A G A C T G A G T C A G C T A G T C A C G T T C G A A C G T C T A G C T G A C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C G T A C T G C G T A C G T A A T C G A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:9
Score:0.45
Offset:1
Orientation:reverse strand
Alignment:GCGAGGCTCTVTGAAG
-CTAGGCCT-------
 A T C G A G T C A C T G G T C A C T A G A C T G A G T C A G C T A G T C A C G T T C G A A C G T C T A G C T G A C G T A A C T G
A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.45
Offset:-2
Orientation:forward strand
Alignment:--GCGAGGCTCTVTGAAG--
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A T C G A G T C A C T G G T C A C T A G A C T G A G T C A G C T A G T C A C G T T C G A A C G T C T A G C T G A C G T A A C T G A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C