Information for 19-TTCWGACAATGGCATG (Motif 36)

C G A T A C G T A G T C C G T A A T C G T C G A A G T C G T C A C G T A A C G T A T C G A C T G A T G C G T C A A C G T C T A G
Reverse Opposite:
A G T C G T C A A C G T A T C G G T A C A T G C C G T A G C A T A C G T C T A G A C G T A T G C G C A T T A C G G T C A C G T A
p-value:1e-8
log p-value:-1.886e+01
Information Content per bp:1.703
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif8.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets54.3 +/- 29.9bp
Average Position of motif in Background51.6 +/- 31.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0168.1_Sox14_2/Jaspar

Match Rank:1
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TTCWGACAATGGCATG
CTCACACAATGGCGC-
 C G A T A C G T A G T C C G T A A T C G T C G A A G T C G T C A C G T A A C G T A T C G A C T G A T G C G T C A A C G T C T A G
A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:2
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:TTCWGACAATGGCATG
--VRAACAATGG----
 C G A T A C G T A G T C C G T A A T C G T C G A A G T C G T C A C G T A A C G T A T C G A C T G A T G C G T C A A C G T C T A G
A C G T A C G T T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G A C G T A C G T A C G T A C G T

Sox17/MA0078.1/Jaspar

Match Rank:3
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:TTCWGACAATGGCATG
----GACAATGNN---
 C G A T A C G T A G T C C G T A A T C G T C G A A G T C G T C A C G T A A C G T A T C G A C T G A T G C G T C A A C G T C T A G
A C G T A C G T A C G T A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G A C G T A C G T A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:4
Score:0.62
Offset:3
Orientation:forward strand
Alignment:TTCWGACAATGGCATG
---RAACAATGGN---
 C G A T A C G T A G T C C G T A A T C G T C G A A G T C G T C A C G T A A C G T A T C G A C T G A T G C G T C A A C G T C T A G
A C G T A C G T A C G T C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C A C G T A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:5
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:TTCWGACAATGGCATG
----AACAAAGG----
 C G A T A C G T A G T C C G T A A T C G T C G A A G T C G T C A C G T A A C G T A T C G A C T G A T G C G T C A A C G T C T A G
A C G T A C G T A C G T A C G T T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:6
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:TTCWGACAATGGCATG
----RACAAWGG----
 C G A T A C G T A G T C C G T A A T C G T C G A A G T C G T C A C G T A A C G T A T C G A C T G A T G C G T C A A C G T C T A G
A C G T A C G T A C G T A C G T T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:TTCWGACAATGGCATG
---GAACAATGGN---
 C G A T A C G T A G T C C G T A A T C G T C G A A G T C G T C A C G T A A C G T A T C G A C T G A T G C G T C A A C G T C T A G
A C G T A C G T A C G T C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G A C G T A C G T A C G T

Sox6/MA0515.1/Jaspar

Match Rank:8
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TTCWGACAATGGCATG
--AAAACAATGG----
 C G A T A C G T A G T C C G T A A T C G T C G A A G T C G T C A C G T A A C G T A T C G A C T G A T G C G T C A A C G T C T A G
A C G T A C G T T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G A C G T A C G T A C G T A C G T

SOX9/MA0077.1/Jaspar

Match Rank:9
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:TTCWGACAATGGCATG
---GAACAATGG----
 C G A T A C G T A G T C C G T A A T C G T C G A A G T C G T C A C G T A A C G T A T C G A C T G A T G C G T C A A C G T C T A G
A C G T A C G T A C G T C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G A C G T A C G T A C G T A C G T

PH0009.1_Bsx/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TTCWGACAATGGCATG
NTNAGNTAATTACCTN
 C G A T A C G T A G T C C G T A A T C G T C G A A G T C G T C A C G T A A C G T A T C G A C T G A T G C G T C A A C G T C T A G
G A T C G A C T A T C G T C G A C T A G A T C G G A C T T G C A G T C A A C G T A C G T C T G A G T A C G A T C A C G T A C T G