Information for 4-TCGCGTGCAA (Motif 26)

A C G T A G T C A C T G A G T C A C T G C G A T A C T G A G T C C G T A C G T A
Reverse Opposite:
G C A T A C G T A C T G A G T C C G T A T G A C A C T G A G T C T A C G C G T A
p-value:1e-8
log p-value:-2.066e+01
Information Content per bp:1.863
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.88%
Number of Background Sequences with motif12.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets44.0 +/- 19.7bp
Average Position of motif in Background63.9 +/- 18.6bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:1
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:TCGCGTGCAA
TTGCGTGCVA
 A C G T A G T C A C T G A G T C A C T G C G A T A C T G A G T C C G T A C G T A
A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A

PB0044.1_Mtf1_1/Jaspar

Match Rank:2
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---TCGCGTGCAA---
GGGCCGTGTGCAAAAA
 A C G T A C G T A C G T A C G T A G T C A C T G A G T C A C T G C G A T A C T G A G T C C G T A C G T A A C G T A C G T A C G T
C A T G A C T G C T A G G A T C G T A C C A T G C A G T A C T G G A C T C A T G G T A C C G T A T G C A G T C A C T G A G C A T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:3
Score:0.71
Offset:1
Orientation:forward strand
Alignment:TCGCGTGCAA
-TGCGTG---
 A C G T A G T C A C T G A G T C A C T G C G A T A C T G A G T C C G T A C G T A
A C G T G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T A C G T

Hes1/MA1099.1/Jaspar

Match Rank:4
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TCGCGTGCAA
NNCGCGTGNN-
 A C G T A C G T A G T C A C T G A G T C A C T G C G A T A C T G A G T C C G T A C G T A
C A T G C T G A T G A C C T A G A G T C T C A G G A C T C T A G A T G C A T G C A C G T

PB0147.1_Max_2/Jaspar

Match Rank:5
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---TCGCGTGCAA-
NNGTCGCGTGNCAC
 A C G T A C G T A C G T A C G T A G T C A C T G A G T C A C T G C G A T A C T G A G T C C G T A C G T A A C G T
G T A C G C T A A C T G A G C T T G A C C T A G A G T C T C A G G A C T A C T G C T A G G T A C T C G A T G A C

E2F(E2F)/Hela-CellCycle-Expression/Homer

Match Rank:6
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TCGCGTGCAA-
TTCGCGCGAAAA
 A C G T A C G T A G T C A C T G A G T C A C T G C G A T A C T G A G T C C G T A C G T A A C G T
A G C T A G C T T A G C A T C G A G T C A C T G A T G C A T C G T C G A C T G A T C G A C T G A

Tcfl5/MA0632.1/Jaspar

Match Rank:7
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TCGCGTGCAA
GGCACGTGCC-
 A C G T A C G T A G T C A C T G A G T C A C T G C G A T A C T G A G T C C G T A C G T A
C T A G A C T G G T A C C T G A A G T C T C A G G A C T C A T G T G A C G A T C A C G T

MTF1/MA0863.1/Jaspar

Match Rank:8
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TCGCGTGCAA-
GTGCCGTGTGCAAA
 A C G T A C G T A C G T A C G T A G T C A C T G A G T C A C T G C G A T A C T G A G T C C G T A C G T A A C G T
C T A G A C G T C T A G G T A C G A T C A C T G A C G T A C T G G A C T A C T G A G T C C G T A T G C A G T C A

Id2/MA0617.1/Jaspar

Match Rank:9
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TCGCGTGCAA
TCACGTGC--
 A C G T A G T C A C T G A G T C A C T G C G A T A C T G A G T C C G T A C G T A
G A C T A G T C C G T A A G T C A C T G A C G T A C T G A G T C A C G T A C G T

Arntl/MA0603.1/Jaspar

Match Rank:10
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TCGCGTGCAA
GGTCACGTGC--
 A C G T A C G T A C G T A G T C A C T G A G T C A C T G C G A T A C T G A G T C C G T A C G T A
C A T G T C A G C A G T G T A C G C T A A G T C C T A G G A C T C A T G G A T C A C G T A C G T