Information for 6-CACTCTCTGCTGR (Motif 15)

G A T C G T C A A G T C A C G T A T G C A C G T A G T C A C G T A T C G A G T C C G A T A C T G C T G A
Reverse Opposite:
A G C T A G T C C G T A A C T G A T G C G T C A C T A G C G T A A T C G G T C A A C T G A C G T C T A G
p-value:1e-10
log p-value:-2.475e+01
Information Content per bp:1.775
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.64%
Number of Background Sequences with motif55.8
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets51.7 +/- 23.7bp
Average Position of motif in Background52.4 +/- 28.2bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PAX5/MA0014.2/Jaspar

Match Rank:1
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CACTCTCTGCTGR----
GTCACGCTTGGCTGCNCNN
 A C G T A C G T G A T C G T C A A G T C A C G T A T G C A C G T A G T C A C G T A T C G A G T C C G A T A C T G C T G A A C G T A C G T A C G T A C G T
C A T G G A C T A G T C G T C A G A T C T C A G T A G C G A C T A G C T A T C G T C A G A T G C G A C T C T A G T G A C G A T C A G T C G C A T A G T C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CACTCTCTGCTGR-
--CCCCCTGCTGTG
 G A T C G T C A A G T C A C G T A T G C A C G T A G T C A C G T A T C G A G T C C G A T A C T G C T G A A C G T
A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

NRL/MA0842.1/Jaspar

Match Rank:3
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CACTCTCTGCTGR-
---AATTTGCTGAC
 G A T C G T C A A G T C A C G T A T G C A C G T A G T C A C G T A T C G A G T C C G A T A C T G C T G A A C G T
A C G T A C G T A C G T C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CACTCTCTGCTGR
NGTCACGCTTGGCTGC
 A C G T A C G T A C G T G A T C G T C A A G T C A C G T A T G C A C G T A G T C A C G T A T C G A G T C C G A T A C T G C T G A
C T A G A C T G A G C T A G T C G T C A G A T C T C A G A T G C G C A T G A C T A T C G T C A G T A G C G A C T C T A G T G A C

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:5
Score:0.58
Offset:7
Orientation:forward strand
Alignment:CACTCTCTGCTGR----
-------TGCTGACTCA
 G A T C G T C A A G T C A C G T A T G C A C G T A G T C A C G T A T C G A G T C C G A T A C T G C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A

MAFK/MA0496.1/Jaspar

Match Rank:6
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CACTCTCTGCTGR-----
---AAANTGCTGACTNAG
 G A T C G T C A A G T C A C G T A T G C A C G T A G T C A C G T A T C G A G T C C G A T A C T G C T G A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C G T A C G T A G C A T C G A T A T C G G T A C A C G T A C T G C T G A A T G C G C A T G A T C C G T A C A T G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:7
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CACTCTCTGCTGR-----
---DCHCAGCAGGRGGCC
 G A T C G T C A A G T C A C G T A T G C A C G T A G T C A C G T A T C G A G T C C G A T A C T G C T G A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CACTCTCTGCTGR
--CTGTCTGG---
 G A T C G T C A A G T C A C G T A T G C A C G T A G T C A C G T A T C G A G T C C G A T A C T G C T G A
A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T

ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.55
Offset:4
Orientation:forward strand
Alignment:CACTCTCTGCTGR------
----GTCWGCTGTYYCTCT
 G A T C G T C A A G T C A C G T A T G C A C G T A G T C A C G T A T C G A G T C C G A T A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G A C G T A G T C C G T A A C T G A G T C G C A T A C T G G C A T A G T C G A C T G A T C G C A T A G T C A G C T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:10
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CACTCTCTGCTGR
AAATCACTGC---
 G A T C G T C A A G T C A C G T A T G C A C G T A G T C A C G T A T C G A G T C C G A T A C T G C T G A
T G C A C G T A G T C A A G C T A G T C G C T A T A G C C G A T C T A G G A T C A C G T A C G T A C G T