Information for 9-AATTGCTACG (Motif 5)

T C G A T G C A A G C T A C G T A T C G A G T C A C G T T C G A T A G C T C A G
Reverse Opposite:
A G T C A T C G A G C T T G C A T A C G T A G C T G C A T C G A A C G T A G C T
p-value:1e-18
log p-value:-4.156e+01
Information Content per bp:1.686
Number of Target Sequences with motif209.0
Percentage of Target Sequences with motif21.77%
Number of Background Sequences with motif4970.7
Percentage of Background Sequences with motif11.71%
Average Position of motif in Targets48.3 +/- 27.6bp
Average Position of motif in Background50.7 +/- 37.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hmx1/MA0896.1/Jaspar

Match Rank:1
Score:0.68
Offset:-7
Orientation:reverse strand
Alignment:-------AATTGCTACG
ANNCATTAATTGCTNGN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T G C A A G C T A C G T A T C G A G T C A C G T T C G A T A G C T C A G
T G C A G C A T A C G T A T G C G C T A G C A T G C A T C T G A C G T A C A G T G A C T C T A G A G T C G A C T A C G T A T C G A C G T

PH0041.1_Hmx1/Jaspar

Match Rank:2
Score:0.68
Offset:-7
Orientation:reverse strand
Alignment:-------AATTGCTACG
ANNCATTAATTGCTNGN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T G C A A G C T A C G T A T C G A G T C A C G T T C G A T A G C T C A G
T G C A G C A T A C G T A T G C G C T A G C A T G C A T C T G A C G T A C A G T G A C T C T A G A G T C G A C T A C G T A T C G A C G T

PB0055.1_Rfx4_1/Jaspar

Match Rank:3
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--AATTGCTACG---
NNCGTTGCTATGGNN
 A C G T A C G T T C G A T G C A A G C T A C G T A T C G A G T C A C G T T C G A T A G C T C A G A C G T A C G T A C G T
G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A

PB0054.1_Rfx3_1/Jaspar

Match Rank:4
Score:0.66
Offset:-6
Orientation:reverse strand
Alignment:------AATTGCTACG-------
NTNNNNNGTTGCTANGGNNCANA
 A C G T A C G T A C G T A C G T A C G T A C G T T C G A T G C A A G C T A C G T A T C G A G T C A C G T T C G A T A G C T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G A T C G T A C G T A G C A T A G T C A T C G C T A G A C G T G A C T C T A G A G T C A G C T C T G A C T G A T A C G A C T G C T A G C A G T T A G C T C G A G T A C C T G A

PB0175.1_Sox4_2/Jaspar

Match Rank:5
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----AATTGCTACG--
GGAAAAATTGTTAGGAA
 A C G T A C G T A C G T A C G T A C G T T C G A T G C A A G C T A C G T A T C G A G T C A C G T T C G A T A G C T C A G A C G T A C G T
T A C G T C A G G C T A C G T A C T G A C T G A C T G A A G C T C G A T T C A G C G A T G A C T C T G A T A C G C T A G C T G A C T G A

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:6
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--AATTGCTACG---
NCCGTTGCTANGNGN
 A C G T A C G T T C G A T G C A A G C T A C G T A T C G A G T C A C G T T C G A T A G C T C A G A C G T A C G T A C G T
G A C T A G T C A T G C C T A G A C G T G A C T C T A G G A T C A G C T C T G A C A G T T A C G A T G C T C A G T C A G

PB0165.1_Sox11_2/Jaspar

Match Rank:7
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--AATTGCTACG--
AAAATTGTTATGAA
 A C G T A C G T T C G A T G C A A G C T A C G T A T C G A G T C A C G T T C G A T A G C T C A G A C G T A C G T
C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A

PB0155.1_Osr2_2/Jaspar

Match Rank:8
Score:0.65
Offset:0
Orientation:forward strand
Alignment:AATTGCTACG------
ACTTGCTACCTACACC
 T C G A T G C A A G C T A C G T A T C G A G T C A C G T T C G A T A G C T C A G A C G T A C G T A C G T A C G T A C G T A C G T
C T G A G A T C G A C T G A C T T A C G A G T C G A C T G C T A G T A C G A T C G C A T T C G A G T A C C G T A A G C T T G A C

PH0024.1_Dlx5/Jaspar

Match Rank:9
Score:0.65
Offset:-7
Orientation:reverse strand
Alignment:-------AATTGCTACG
NANNGNTAATTACCNN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T G C A A G C T A C G T A T C G A G T C A C G T T C G A T A G C T C A G
A T G C T C G A A C T G T G C A T C A G A T G C G A C T G T C A C G T A G A C T C A G T C T G A A G T C A G T C A T G C T A G C A C G T

Hmx3/MA0898.1/Jaspar

Match Rank:10
Score:0.63
Offset:-7
Orientation:reverse strand
Alignment:-------AATTGCTACG
ATTNNTTAATTGCTTGT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T G C A A G C T A C G T A T C G A G T C A C G T T C G A T A G C T C A G
G C T A G C A T A G C T A G T C C G A T G C A T G C A T C T G A C G T A C A G T G A C T C T A G G A T C A G C T A C G T T A C G A C G T