Information for 19-CGCATGCGCA (Motif 19)

A T G C C T A G T G A C G C T A A G C T T C A G G T A C A C T G G T A C G C T A
Reverse Opposite:
C G A T C A T G T G A C C A T G A G T C T C G A C G A T A C T G G A T C T A C G
p-value:1e-6
log p-value:-1.586e+01
Information Content per bp:1.656
Number of Target Sequences with motif43.0
Percentage of Target Sequences with motif4.48%
Number of Background Sequences with motif772.2
Percentage of Background Sequences with motif1.82%
Average Position of motif in Targets54.2 +/- 26.5bp
Average Position of motif in Background48.6 +/- 38.5bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NRF(NRF)/Promoter/Homer

Match Rank:1
Score:0.92
Offset:-1
Orientation:reverse strand
Alignment:-CGCATGCGCA-
GCGCATGCGCAC
 A C G T A T G C C T A G T G A C G C T A A G C T T C A G G T A C A C T G G T A C G C T A A C G T
A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C C T G A T A G C

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.92
Offset:-1
Orientation:reverse strand
Alignment:-CGCATGCGCA-
GCGCATGCGCAG
 A C G T A T G C C T A G T G A C G C T A A G C T T C A G G T A C A C T G G T A C G C T A A C G T
T C A G T G A C C T A G T A G C T G C A A C G T T A C G A G T C A C T G A G T C T C G A T A C G

NRF1/MA0506.1/Jaspar

Match Rank:3
Score:0.89
Offset:-1
Orientation:forward strand
Alignment:-CGCATGCGCA
GCGCCTGCGCA
 A C G T A T G C C T A G T G A C G C T A A G C T T C A G G T A C A C T G G T A C G C T A
T C A G G T A C T C A G A T G C T G A C A C G T A C T G A G T C A T C G G T A C T C G A

Hes1/MA1099.1/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CGCATGCGCA
GGCACGCGTC
 A T G C C T A G T G A C G C T A A G C T T C A G G T A C A C T G G T A C G C T A
T A C G T A C G G A T C C T G A A G T C T C A G G A T C A C T G G A C T G T A C

EGR2/MA0472.2/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CGCATGCGCA
ACGCCCACGCA
 A C G T A T G C C T A G T G A C G C T A A G C T T C A G G T A C A C T G G T A C G C T A
G T C A A G T C C T A G A G T C T G A C A G T C T G C A A G T C C A T G A G T C C T G A

PB0044.1_Mtf1_1/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CGCATGCGCA----
GGGCCGTGTGCAAAAA
 A C G T A C G T A T G C C T A G T G A C G C T A A G C T T C A G G T A C A C T G G T A C G C T A A C G T A C G T A C G T A C G T
C A T G A C T G C T A G G A T C G T A C C A T G C A G T A C T G G A C T C A T G G T A C C G T A T G C A G T C A C T G A G C A T

EGR3/MA0732.1/Jaspar

Match Rank:7
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CGCATGCGCA--
CTACGCCCACGCACT
 A C G T A C G T A C G T A T G C C T A G T G A C G C T A A G C T T C A G G T A C A C T G G T A C G C T A A C G T A C G T
G A T C G A C T G T C A G A T C C T A G A T G C A G T C A G T C T G C A A T G C T C A G G A T C C T G A G A T C G C A T

HIC2/MA0738.1/Jaspar

Match Rank:8
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CGCATGCGCA--
---ATGCCCACC
 A T G C C T A G T G A C G C T A A G C T T C A G G T A C A C T G G T A C G C T A A C G T A C G T
A C G T A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C

PB0095.1_Zfp161_1/Jaspar

Match Rank:9
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----CGCATGCGCA-
NCANGCGCGCGCGCCA
 A C G T A C G T A C G T A C G T A C G T A T G C C T A G T G A C G C T A A G C T T C A G G T A C A C T G G T A C G C T A A C G T
G C A T G A T C C T G A C T A G C T A G G A T C T C A G G A T C C T A G A G T C C T A G A G T C T A C G G A T C G A T C G T C A

PB0026.1_Gm397_1/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CGCATGCGCA------
NNGTATGTGCACATNNN
 A C G T A T G C C T A G T G A C G C T A A G C T T C A G G T A C A C T G G T A C G C T A A C G T A C G T A C G T A C G T A C G T A C G T
C T G A G T A C C A T G C A G T T C G A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A G C A T G T A C C G A T C A T G