Information for 7-CTCTCATCAAGATGGA (Motif 14)

T G A C A G C T A G T C A G C T A G T C C G T A A C G T G T A C C G T A C G T A A C T G C G T A A C G T A C T G A C T G G T C A
Reverse Opposite:
A C G T A G T C A G T C G T C A A C G T A G T C A C G T C G A T A C T G C G T A C G A T A C T G C T G A A C T G C T G A A C T G
p-value:1e-8
log p-value:-1.977e+01
Information Content per bp:1.893
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif5.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets34.2 +/- 25.6bp
Average Position of motif in Background31.4 +/- 19.8bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1/MA0095.2/Jaspar

Match Rank:1
Score:0.63
Offset:7
Orientation:forward strand
Alignment:CTCTCATCAAGATGGA---
-------CAAGATGGCGGC
 T G A C A G C T A G T C A G C T A G T C C G T A A C G T G T A C C G T A C G T A A C T G C G T A A C G T A C T G A C T G G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

YY1(Zf)/Promoter/Homer

Match Rank:2
Score:0.58
Offset:7
Orientation:forward strand
Alignment:CTCTCATCAAGATGGA---
-------CAAGATGGCGGC
 T G A C A G C T A G T C A G C T A G T C C G T A A C G T G T A C C G T A C G T A A C T G C G T A A C G T A C T G A C T G G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C

PH0134.1_Pbx1/Jaspar

Match Rank:3
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CTCTCATCAAGATGGA
TCACCCATCAATAAACA
 A C G T T G A C A G C T A G T C A G C T A G T C C G T A A C G T G T A C C G T A C G T A A C T G C G T A A C G T A C T G A C T G G T C A
G A C T A G T C C G T A G A T C G T A C T G A C C T G A C G A T G T A C G T C A G C T A C G A T G T A C G C T A C G A T T G A C T G C A

PH0068.1_Hoxc13/Jaspar

Match Rank:4
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CTCTCATCAAGATGGA
AAAGCTCGTAAAATTT--
 A C G T A C G T T G A C A G C T A G T C A G C T A G T C C G T A A C G T G T A C C G T A C G T A A C T G C G T A A C G T A C T G A C T G G T C A
G C A T G C T A C G T A A C T G T A G C A G C T G A T C C T A G A G C T C G T A C G T A C G T A G C T A G C A T A G C T C G A T A C G T A C G T

OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:5
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:CTCTCATCAAGATGGA-
--CTCATGAATATTCAT
 T G A C A G C T A G T C A G C T A G T C C G T A A C G T G T A C C G T A C G T A A C T G C G T A A C G T A C T G A C T G G T C A A C G T
A C G T A C G T T A G C G A C T G A T C C G T A A C G T T C A G G T C A C G T A A C G T C G T A C G A T A C G T A G T C C G T A C G A T

PH0048.1_Hoxa13/Jaspar

Match Rank:6
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--CTCTCATCAAGATGGA
AAACCTCGTAAAATTT--
 A C G T A C G T T G A C A G C T A G T C A G C T A G T C C G T A A C G T G T A C C G T A C G T A A C T G C G T A A C G T A C T G A C T G G T C A
G C T A C G T A G C T A A T C G T A G C A G C T G A T C C T A G A G C T C G T A C G T A G C T A G C T A G C A T A C G T C G A T A C G T A C G T

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:7
Score:0.50
Offset:8
Orientation:reverse strand
Alignment:CTCTCATCAAGATGGA----
--------ATGATKGATGRC
 T G A C A G C T A G T C A G C T A G T C C G T A A C G T G T A C C G T A C G T A A C T G C G T A A C G T A C T G A C T G G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C G A T A T C G C G T A C G A T C A G T C T A G C G T A C G A T A C T G C T G A A T G C

PH0151.1_Pou6f1_1/Jaspar

Match Rank:8
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---CTCTCATCAAGATGGA
NNNACCTCATTATCNTN--
 A C G T A C G T A C G T T G A C A G C T A G T C A G C T A G T C C G T A A C G T G T A C C G T A C G T A A C T G C G T A A C G T A C T G A C T G G T C A
C A T G G A T C G T C A C G T A T A C G G T A C A C G T G T A C C G T A C G A T C G A T C G T A C G A T A T G C A C T G C G A T A G T C A C G T A C G T

ZBTB18/MA0698.1/Jaspar

Match Rank:9
Score:0.50
Offset:4
Orientation:forward strand
Alignment:CTCTCATCAAGATGGA-
----CATCCAGATGTTC
 T G A C A G C T A G T C A G C T A G T C C G T A A C G T G T A C C G T A C G T A A C T G C G T A A C G T A C T G A C T G G T C A A C G T
A C G T A C G T A C G T A C G T G T A C C G T A A C G T T G A C G T A C C G T A A T C G G T C A A C G T C T A G G A C T C A G T A G T C

PB0022.1_Gata5_1/Jaspar

Match Rank:10
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---CTCTCATCAAGATGGA
NTNTTCTTATCAGTNTN--
 A C G T A C G T A C G T T G A C A G C T A G T C A G C T A G T C C G T A A C G T G T A C C G T A C G T A A C T G C G T A A C G T A C T G A C T G G T C A
G C T A G C A T G T A C A G C T A G C T A T G C C G A T C G A T C G T A A C G T A G T C C G T A T C A G G A C T G C A T G C A T C G T A A C G T A C G T