Information for 7-CGATTGGCTG (Motif 10)

T G A C C T A G G T C A C A G T G A C T A C T G A T C G A G T C G A C T A T C G
Reverse Opposite:
T A G C C T G A T C A G T A G C T G A C C T G A G T C A C A G T G A T C A C T G
p-value:1e-12
log p-value:-2.885e+01
Information Content per bp:1.679
Number of Target Sequences with motif72.0
Percentage of Target Sequences with motif7.70%
Number of Background Sequences with motif1341.1
Percentage of Background Sequences with motif2.92%
Average Position of motif in Targets49.7 +/- 25.6bp
Average Position of motif in Background50.4 +/- 32.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFY(CCAAT)/Promoter/Homer

Match Rank:1
Score:0.82
Offset:-1
Orientation:reverse strand
Alignment:-CGATTGGCTG
CCGATTGGCT-
 A C G T T G A C C T A G G T C A C A G T G A C T A C T G A T C G A G T C G A C T A T C G
A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:2
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:CGATTGGCTG--
TGATTGGCTANN
 T G A C C T A G G T C A C A G T G A C T A C T G A T C G A G T C G A C T A T C G A C G T A C G T
A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

NFYB/MA0502.1/Jaspar

Match Rank:3
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-CGATTGGCTG----
CTGATTGGTCNATTT
 A C G T T G A C C T A G G T C A C A G T G A C T A C T G A T C G A G T C G A C T A T C G A C G T A C G T A C G T A C G T
A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

NFIC/MA0161.1/Jaspar

Match Rank:4
Score:0.69
Offset:3
Orientation:forward strand
Alignment:CGATTGGCTG
---TTGGCA-
 T G A C C T A G G T C A C A G T G A C T A C T G A T C G A G T C G A C T A T C G
A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:5
Score:0.67
Offset:3
Orientation:forward strand
Alignment:CGATTGGCTG-
---TWGTCTGV
 T G A C C T A G G T C A C A G T G A C T A C T G A T C G A G T C G A C T A T C G A C G T
A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:6
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CGATTGGCTG-
BTGABTGACAGS
 A C G T T G A C C T A G G T C A C A G T G A C T A C T G A T C G A G T C G A C T A T C G A C G T
A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C

NFIX/MA0671.1/Jaspar

Match Rank:7
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:CGATTGGCTG-
--NTTGGCANN
 T G A C C T A G G T C A C A G T G A C T A C T G A T C G A G T C G A C T A T C G A C G T
A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

NFYA/MA0060.2/Jaspar

Match Rank:8
Score:0.66
Offset:-7
Orientation:forward strand
Alignment:-------CGATTGGCTG-
AGAGTGCTGATTGGTCCA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C C T A G G T C A C A G T G A C T A C T G A T C G A G T C G A C T A T C G A C G T
G C T A C A T G T G C A T A C G G A C T A C T G A G T C A G C T A T C G C T G A A G C T C G A T T C A G T A C G G A C T A G T C T A G C T C G A

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CGATTGGCTG-
NTGATTGACAGN
 A C G T T G A C C T A G G T C A C A G T G A C T A C T G A T C G A G T C G A C T A T C G A C G T
A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G

Dux/MA0611.1/Jaspar

Match Rank:10
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CGATTGGCTG
TTGATTGN---
 A C G T T G A C C T A G G T C A C A G T G A C T A C T G A T C G A G T C G A C T A T C G
G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G A C G T A C G T A C G T