Information for 3-CCTTATATGG (Motif 3)

G A T C G A T C G C A T A G C T C G T A G C A T G C T A G A C T C T A G A T C G
Reverse Opposite:
T A G C A G T C C T G A C G A T C G T A G C A T T C G A C G T A C T A G C T A G
p-value:1e-16
log p-value:-3.868e+01
Information Content per bp:1.677
Number of Target Sequences with motif37.0
Percentage of Target Sequences with motif4.39%
Number of Background Sequences with motif298.5
Percentage of Background Sequences with motif0.73%
Average Position of motif in Targets54.1 +/- 24.4bp
Average Position of motif in Background49.6 +/- 28.0bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer

Match Rank:1
Score:0.91
Offset:0
Orientation:forward strand
Alignment:CCTTATATGG--
CCATATATGGNA
 G A T C G A T C G C A T A G C T C G T A G C A T G C T A G A C T C T A G A T C G A C G T A C G T
A T G C A G T C G C T A C G A T C G T A G C A T G C T A C G A T C T A G C A T G T G A C G T C A

PB0078.1_Srf_1/Jaspar

Match Rank:2
Score:0.88
Offset:-2
Orientation:reverse strand
Alignment:--CCTTATATGG--
TNCCATATATGGNA
 A C G T A C G T G A T C G A T C G C A T A G C T C G T A G C A T G C T A G A C T C T A G A T C G A C G T A C G T
C A G T C G A T G T A C A G T C C G T A C G A T C G T A G C A T C G T A C G A T C T A G C A T G C G T A C G T A

SRF/MA0083.3/Jaspar

Match Rank:3
Score:0.85
Offset:-3
Orientation:reverse strand
Alignment:---CCTTATATGG---
TGNCCATATATGGTCA
 A C G T A C G T A C G T G A T C G A T C G C A T A G C T C G T A G C A T G C T A G A C T C T A G A T C G A C G T A C G T A C G T
G C A T A C T G G T C A G A T C A T G C C G T A C G A T T G C A A G C T G C T A G C A T T C A G A T C G C A G T T G A C C G T A

MF0008.1_MADS_class/Jaspar

Match Rank:4
Score:0.83
Offset:0
Orientation:forward strand
Alignment:CCTTATATGG
CCATATATGG
 G A T C G A T C G C A T A G C T C G T A G C A T G C T A G A C T C T A G A T C G
G A T C A G T C G C T A C G A T C G T A C G A T C G T A G C A T C T A G C A T G

TATA-Box(TBP)/Promoter/Homer

Match Rank:5
Score:0.78
Offset:0
Orientation:forward strand
Alignment:CCTTATATGG--
CCTTTTATAGNC
 G A T C G A T C G C A T A G C T C G T A G C A T G C T A G A C T C T A G A T C G A C G T A C G T
A T G C G A T C G A C T A G C T C G A T C G A T G T C A C G A T T C G A A T C G T A G C T A G C

PB0184.1_Tbp_2/Jaspar

Match Rank:6
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----CCTTATATGG-
GNNCGCTTAAATCGG
 A C G T A C G T A C G T A C G T G A T C G A T C G C A T A G C T C G T A G C A T G C T A G A C T C T A G A T C G A C G T
C A T G T A C G C A G T G T A C A T C G T A G C C G A T C A G T C G T A C G T A C T G A G C A T A T G C T A C G A C T G

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:7
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CCTTATATGG
NCCTTATCTG-
 A C G T G A T C G A T C G C A T A G C T C G T A G C A T G C T A G A C T C T A G A T C G
A G C T A G T C A T G C A C G T A C G T C G T A A C G T A G T C C G A T A T C G A C G T

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:8
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CCTTATATGG
NNCTTATCTN-
 A C G T G A T C G A T C G C A T A G C T C G T A G C A T G C T A G A C T C T A G A T C G
A G C T A G T C A T G C A G C T A C G T C G T A A C G T A G T C C G A T A T G C A C G T

HLTF/MA0109.1/Jaspar

Match Rank:9
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CCTTATATGG
AACCTTATAT--
 A C G T A C G T G A T C G A T C G C A T A G C T C G T A G C A T G C T A G A C T C T A G A T C G
C G T A G C T A G T A C A G T C C G A T A C G T C G T A A C G T T C G A G A C T A C G T A C G T

TBP/MA0108.2/Jaspar

Match Rank:10
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----CCTTATATGG
NNNNNNCTTTTATAN
 A C G T A C G T A C G T A C G T A C G T G A T C G A T C G C A T A G C T C G T A G C A T G C T A G A C T C T A G A T C G
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C