Information for 15-GGCCAGTACT (Motif 29)

A C T G A C T G A G T C A G T C C G T A A C T G A C G T C G T A A G T C A C G T
Reverse Opposite:
C G T A A C T G A C G T C G T A A G T C A C G T A C T G A C T G A G T C A G T C
p-value:1e-6
log p-value:-1.597e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.48%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets41.5 +/- 17.7bp
Average Position of motif in Background38.2 +/- 25.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GGCCAGTACT-----
ACTCCAAGTACTTGGAA
 A C G T A C G T A C T G A C T G A G T C A G T C C G T A A C T G A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
T C G A G T A C C G A T A T G C T A G C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A C T G T C A G T G C A G T C A

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GGCCAGTACT
AAGGCAAGTGT-
 A C G T A C G T A C T G A C T G A G T C A G T C C G T A A C T G A C G T C G T A A G T C A C G T
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:3
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GGCCAGTACT------
CGAACAGTGCTCACTAT
 A C G T A C T G A C T G A G T C A G T C C G T A A C T G A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T

NFIC/MA0161.1/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GGCCAGTACT
TGCCAA----
 A C T G A C T G A G T C A G T C C G T A A C T G A C G T C G T A A G T C A C G T
G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:5
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GGCCAGTACT
CGTGCCAAG---
 A C G T A C G T A C T G A C T G A G T C A G T C C G T A A C T G A C G T C G T A A G T C A C G T
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:6
Score:0.54
Offset:3
Orientation:forward strand
Alignment:GGCCAGTACT---
---AAGCACTTAA
 A C T G A C T G A G T C A G T C C G T A A C T G A C G T C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A

PB0195.1_Zbtb3_2/Jaspar

Match Rank:7
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----GGCCAGTACT--
NNNNTGCCAGTGATTG
 A C G T A C G T A C G T A C G T A C T G A C T G A G T C A G T C C G T A A C T G A C G T C G T A A G T C A C G T A C G T A C G T
G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G

PH0117.1_Nkx3-1/Jaspar

Match Rank:8
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GGCCAGTACT------
TACTAAGTACTTAAATG
 A C G T A C T G A C T G A G T C A G T C C G T A A C T G A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G A T G A T C C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T G A C G T A C G A T A T C G

PH0112.1_Nkx2-3/Jaspar

Match Rank:9
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GGCCAGTACT-----
CNTTAAGTACTTAANG
 A C G T A C T G A C T G A G T C A G T C C G T A A C T G A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G A T C C G T A G A C T A G C T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T C G T A T C G A T C G A C T A G

POL004.1_CCAAT-box/Jaspar

Match Rank:10
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---GGCCAGTACT
ACTAGCCAATCA-
 A C G T A C G T A C G T A C T G A C T G A G T C A G T C C G T A A C T G A C G T C G T A A G T C A C G T
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A A C G T