Information for 10-KMTCAGCKKGCASSCY (Motif 26)

A C G T G T A C A G C T A G T C C G T A A C T G A G T C A C G T A C G T A T C G G T A C C G T A T A C G A T G C A G T C A G T C
Reverse Opposite:
C T A G C T A G A T C G A T G C A C G T A C T G A T G C G T C A T G C A A C T G A G T C A C G T A C T G T C G A A C T G G T C A
p-value:1e-7
log p-value:-1.755e+01
Information Content per bp:1.814
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif8.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets48.3 +/- 20.4bp
Average Position of motif in Background51.3 +/- 16.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:1
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:KMTCAGCKKGCASSCY
DCTCAGCAGG------
 A C G T G T A C A G C T A G T C C G T A A C T G A G T C A C G T A C G T A T C G G T A C C G T A T A C G A T G C A G T C A G T C
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:2
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:KMTCAGCKKGCASSCY
DCHCAGCAGGRGGCC-
 A C G T G T A C A G C T A G T C C G T A A C T G A G T C A C G T A C G T A T C G G T A C C G T A T A C G A T G C A G T C A G T C
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:3
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--KMTCAGCKKGCASSCY
GAGCACAGCAGGACA---
 A C G T A C G T A C G T G T A C A G C T A G T C C G T A A C T G A G T C A C G T A C G T A T C G G T A C C G T A T A C G A T G C A G T C A G T C
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A A C G T A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:4
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--KMTCAGCKKGCASSCY
CCACACAGCAGGAGA---
 A C G T A C G T A C G T G T A C A G C T A G T C C G T A A C T G A G T C A C G T A C G T A T C G G T A C C G T A T A C G A T G C A G T C A G T C
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--KMTCAGCKKGCASSCY
CCACACAGCAGGAGA---
 A C G T A C G T A C G T G T A C A G C T A G T C C G T A A C T G A G T C A C G T A C G T A T C G G T A C C G T A T A C G A T G C A G T C A G T C
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T A C G T A C G T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:6
Score:0.58
Offset:0
Orientation:forward strand
Alignment:KMTCAGCKKGCASSCY
NAHCAGCTGD------
 A C G T G T A C A G C T A G T C C G T A A C T G A G T C A C G T A C G T A T C G G T A C C G T A T A C G A T G C A G T C A G T C
G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T A C G T A C G T A C G T A C G T A C G T A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:7
Score:0.57
Offset:0
Orientation:forward strand
Alignment:KMTCAGCKKGCASSCY
NAACAGCTGG------
 A C G T G T A C A G C T A G T C C G T A A C T G A G T C A C G T A C G T A T C G G T A C C G T A T A C G A T G C A G T C A G T C
C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.55
Offset:1
Orientation:forward strand
Alignment:KMTCAGCKKGCASSCY
-CACAGCAGGGGG---
 A C G T G T A C A G C T A G T C C G T A A C T G A G T C A C G T A C G T A T C G G T A C C G T A T A C G A T G C A G T C A G T C
A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.55
Offset:3
Orientation:forward strand
Alignment:KMTCAGCKKGCASSCY
---CAGCC--------
 A C G T G T A C A G C T A G T C C G T A A C T G A G T C A C G T A C G T A T C G G T A C C G T A T A C G A T G C A G T C A G T C
A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:10
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-KMTCAGCKKGCASSCY
GKVTCADRTTWC-----
 A C G T A C G T G T A C A G C T A G T C C G T A A C T G A G T C A C G T A C G T A T C G G T A C C G T A T A C G A T G C A G T C A G T C
C T A G C A T G T G C A A C G T A G T C C G T A C A T G T C A G A C G T A C G T G C T A A G T C A C G T A C G T A C G T A C G T A C G T