p-value: | 1e-8 |
log p-value: | -1.873e+01 |
Information Content per bp: | 1.530 |
Number of Target Sequences with motif | 4.0 |
Percentage of Target Sequences with motif | 0.48% |
Number of Background Sequences with motif | 1.9 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 60.8 +/- 18.8bp |
Average Position of motif in Background | 32.4 +/- 12.0bp |
Strand Bias (log2 ratio + to - strand density) | 1.6 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer
Match Rank: | 1 |
Score: | 0.57 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | CAGACATGCCCTCAGC- -----ATGCCCTGAGGC |
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Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer
Match Rank: | 2 |
Score: | 0.57 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CAGACATGCCCTCAGC CCAGACRSVB------- |
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PB0060.1_Smad3_1/Jaspar
Match Rank: | 3 |
Score: | 0.57 |
Offset: | -6 |
Orientation: | forward strand |
Alignment: | ------CAGACATGCCCTCAGC CAAATCCAGACATCACA----- |
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THAP1/MA0597.1/Jaspar
Match Rank: | 4 |
Score: | 0.55 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | CAGACATGCCCTCAGC -----CTGCCCGCA-- |
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THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer
Match Rank: | 5 |
Score: | 0.55 |
Offset: | 6 |
Orientation: | reverse strand |
Alignment: | CAGACATGCCCTCAGC ------TGACCTYA-- |
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HIC2/MA0738.1/Jaspar
Match Rank: | 6 |
Score: | 0.54 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | CAGACATGCCCTCAGC -----ATGCCCACC-- |
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Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer
Match Rank: | 7 |
Score: | 0.54 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CAGACATGCCCTCAGC CCAGACAG--------- |
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c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer
Match Rank: | 8 |
Score: | 0.54 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | CAGACATGCCCTCAGC- -----ATGACGTCATCN |
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JUN/MA0488.1/Jaspar
Match Rank: | 9 |
Score: | 0.54 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | CAGACATGCCCTCAGC-- -----ATGACATCATCNN |
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AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer
Match Rank: | 10 |
Score: | 0.54 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | CAGACATGCCCTCAGC- -----WTGSCCTSAGGS |
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