Information for 15-CAGTGAGGCCTGA (Motif 21)

A G T C C G T A A C T G A C G T A C T G C G T A A C T G A C T G G T A C A G T C A C G T C T A G C T G A
Reverse Opposite:
A G C T A G T C C G T A A C T G A C T G A G T C A G T C A C G T A G T C C G T A A G T C A C G T A C T G
p-value:1e-8
log p-value:-1.873e+01
Information Content per bp:1.924
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.48%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets56.6 +/- 22.7bp
Average Position of motif in Background17.2 +/- 4.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:1
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-CAGTGAGGCCTGA-
SCAGYCADGCATGAC
 A C G T A G T C C G T A A C T G A C G T A C T G C G T A A C T G A C T G G T A C A G T C A C G T C T A G C T G A A C G T
A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.69
Offset:5
Orientation:forward strand
Alignment:CAGTGAGGCCTGA
-----AGGCCTNG
 A G T C C G T A A C T G A C G T A C T G C G T A A C T G A C T G G T A C A G T C A C G T C T A G C T G A
A C G T A C G T A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:3
Score:0.63
Offset:5
Orientation:forward strand
Alignment:CAGTGAGGCCTGA
-----AGGCCTAG
 A G T C C G T A A C T G A C G T A C T G C G T A A C T G A C T G G T A C A G T C A C G T C T A G C T G A
A C G T A C G T A C G T A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CAGTGAGGCCTGA--
GCAGCCAAGCGTGACN
 A C G T A G T C C G T A A C T G A C G T A C T G C G T A A C T G A C T G G T A C A G T C A C G T C T A G C T G A A C G T A C G T
A C T G G A T C C T G A A T C G A G T C T A G C C T G A C G T A T A C G A G T C C T A G C A G T T C A G T C G A T G A C G A T C

PAX9/MA0781.1/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CAGTGAGGCCTGA--
TGCAGTCATGCGTGACG
 A C G T A C G T A G T C C G T A A C T G A C G T A C T G C G T A A C T G A C T G G T A C A G T C A C G T C T A G C T G A A C G T A C G T
C A G T A C T G G T A C C T G A A T C G A G C T A T G C C T G A C G A T A T C G A G T C C T A G A C G T C T A G C G T A G T A C T A C G

Zfx/MA0146.2/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CAGTGAGGCCTGA
GGGGCCGAGGCCTG-
 A C G T A C G T A G T C C G T A A C T G A C G T A C T G C G T A A C T G A C T G G T A C A G T C A C G T C T A G C T G A
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CAGTGAGGCCTGA---
NNNNTGAGCACTGTNNG
 A C G T A G T C C G T A A C T G A C G T A C T G C G T A A C T G A C T G G T A C A G T C A C G T C T A G C T G A A C G T A C G T A C G T
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

PAX1/MA0779.1/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CAGTGAGGCCTGA--
NGCANTCATGCGTGACG
 A C G T A C G T A G T C C G T A A C T G A C G T A C T G C G T A A C T G A C T G G T A C A G T C A C G T C T A G C T G A A C G T A C G T
C A G T A C T G G T A C C T G A A T C G A G C T T A G C C T G A C G A T A T C G G A T C C T A G A C G T C T A G C G T A G T A C T A C G

Pax6/MA0069.1/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CAGTGAGGCCTGA-
AANTCATGCGTGAA
 A G T C C G T A A C T G A C G T A C T G C G T A A C T G A C T G G T A C A G T C A C G T C T A G C T G A A C G T
G T C A T C G A A G T C G A C T A T G C C T G A C G A T A T C G G A T C C T A G A C G T C T A G C G T A T C G A

PAX5/MA0014.2/Jaspar

Match Rank:10
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----CAGTGAGGCCTGA-
GAGGGCAGCCAAGCGTGAC
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A C G T A C T G C G T A A C T G A C T G G T A C A G T C A C G T C T A G C T G A A C G T
T C A G C G T A T C A G C T A G A C T G G A T C C T G A T A C G A G T C T A G C T C G A C T G A A T C G A G T C C T A G C A G T C T A G C T G A G T A C