Information for 9-GCATTGTGGG (Motif 17)

A C T G T A G C G C T A C G A T C G A T A T C G C G A T C T A G C T A G A C T G
Reverse Opposite:
A G T C G A T C A G T C C G T A A T G C C G T A C G T A C G A T A T C G A G T C
p-value:1e-10
log p-value:-2.304e+01
Information Content per bp:1.841
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.26%
Number of Background Sequences with motif132.2
Percentage of Background Sequences with motif0.32%
Average Position of motif in Targets53.3 +/- 23.0bp
Average Position of motif in Background46.7 +/- 29.4bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF143/MA0088.2/Jaspar

Match Rank:1
Score:0.85
Offset:-4
Orientation:reverse strand
Alignment:----GCATTGTGGG--
CAATGCATTGTGGGTA
 A C G T A C G T A C G T A C G T A C T G T A G C G C T A C G A T C G A T A T C G C G A T C T A G C T A G A C T G A C G T A C G T
G A T C C T G A C T G A C A G T A C T G A G T C G C T A G A C T A G C T T C A G G A C T A C T G A C T G A C T G G C A T T C G A

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:2
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-GCATTGTGGG----
RGSMTBCTGGGAAAT
 A C G T A C T G T A G C G C T A C G A T C G A T A T C G C G A T C T A G C T A G A C T G A C G T A C G T A C G T A C G T
C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T

Sox17/MA0078.1/Jaspar

Match Rank:3
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-GCATTGTGGG
CTCATTGTC--
 A C G T A C T G T A G C G C T A C G A T C G A T A T C G C G A T C T A G C T A G A C T G
G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:4
Score:0.69
Offset:1
Orientation:forward strand
Alignment:GCATTGTGGG
-CTTTGT---
 A C T G T A G C G C T A C G A T C G A T A T C G C G A T C T A G C T A G A C T G
A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:5
Score:0.69
Offset:0
Orientation:forward strand
Alignment:GCATTGTGGG
CCWTTGTYYB
 A C T G T A G C G C T A C G A T C G A T A T C G C G A T C T A G C T A G A C T G
A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G

PB0168.1_Sox14_2/Jaspar

Match Rank:6
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---GCATTGTGGG--
NNNCCATTGTGTNAN
 A C G T A C G T A C G T A C T G T A G C G C T A C G A T C G A T A T C G C G A T C T A G C T A G A C T G A C G T A C G T
A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:7
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GCATTGTGGG
CCATTGTTNY
 A C T G T A G C G C T A C G A T C G A T A T C G C G A T C T A G C T A G A C T G
A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:8
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GCATTGTGGG
CCATTGTTYB
 A C T G T A G C G C T A C G A T C G A T A T C G C G A T C T A G C T A G A C T G
A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:9
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----GCATTGTGGG
AGGVNCCTTTGT---
 A C G T A C G T A C G T A C G T A C G T A C T G T A G C G C T A C G A T C G A T A T C G C G A T C T A G C T A G A C T G
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T A C G T A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:10
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GCATTGTGGG
CCWTTGTY--
 A C T G T A G C G C T A C G A T C G A T A T C G C G A T C T A G C T A G A C T G
A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T A C G T A C G T