Information for 10-AGTARGCACATAC (Motif 12)

C G T A C T A G A G C T G T C A C T A G C T A G A G T C C G T A A G T C C G T A C G A T C G T A A T G C
Reverse Opposite:
A T C G G A C T C G T A A C G T A C T G A C G T A C T G A G T C A G T C A C G T C T G A G A T C A C G T
p-value:1e-10
log p-value:-2.422e+01
Information Content per bp:1.792
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.4 +/- 28.0bp
Average Position of motif in Background89.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Myc/MA0147.2/Jaspar

Match Rank:1
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:AGTARGCACATAC
---AAGCACATGG
 C G T A C T A G A G C T G T C A C T A G C T A G A G T C C G T A A G T C C G T A C G A T C G T A A T G C
A C G T A C G T A C G T T C G A C T G A T A C G A G T C C G T A A G T C C T G A A C G T A C T G A C T G

PB0130.1_Gm397_2/Jaspar

Match Rank:2
Score:0.64
Offset:1
Orientation:forward strand
Alignment:AGTARGCACATAC----
-AGCGGCACACACGCAA
 C G T A C T A G A G C T G T C A C T A G C T A G A G T C C G T A A G T C C G T A C G A T C G T A A T G C A C G T A C G T A C G T A C G T
A C G T C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

PB0208.1_Zscan4_2/Jaspar

Match Rank:3
Score:0.63
Offset:1
Orientation:forward strand
Alignment:AGTARGCACATAC----
-CGAAGCACACAAAATA
 C G T A C T A G A G C T G T C A C T A G C T A G A G T C C G T A A G T C C G T A C G A T C G T A A T G C A C G T A C G T A C G T A C G T
A C G T G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AGTARGCACATAC
-CCAGGAACAG--
 C G T A C T A G A G C T G T C A C T A G C T A G A G T C C G T A A G T C C G T A C G A T C G T A A T G C
A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T

MAFK/MA0496.1/Jaspar

Match Rank:5
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---AGTARGCACATAC
CTGAGTCAGCAATTT-
 A C G T A C G T A C G T C G T A C T A G A G C T G T C A C T A G C T A G A G T C C G T A A G T C C G T A C G A T C G T A A T G C
G T A C G C A T C T A G C G T A T A C G A G C T G T A C C G T A A C T G A T G C G C T A C G T A G C A T G C A T G C A T A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:6
Score:0.59
Offset:3
Orientation:forward strand
Alignment:AGTARGCACATAC
---AAGCACTTAA
 C G T A C T A G A G C T G T C A C T A G C T A G A G T C C G T A A G T C C G T A C G A T C G T A A T G C
A C G T A C G T A C G T T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A

NRL/MA0842.1/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AGTARGCACATAC
-GTCAGCANNTN-
 C G T A C T A G A G C T G T C A C T A G C T A G A G T C C G T A A G T C C G T A C G A T C G T A A T G C
A C G T T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T A C G T

PB0041.1_Mafb_1/Jaspar

Match Rank:8
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----AGTARGCACATAC
NCTANGTCAGCAAATTT
 A C G T A C G T A C G T A C G T C G T A C T A G A G C T G T C A C T A G C T A G A G T C C G T A A G T C C G T A C G A T C G T A A T G C
C A G T G A T C A G C T C G T A G C T A T C A G A C G T G T A C C G T A C A T G G A T C C G T A G T C A C G T A G C A T G A C T C G A T

PB0026.1_Gm397_1/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AGTARGCACATAC--
CAGATGTGCACATACGT
 A C G T A C G T C G T A C T A G A G C T G T C A C T A G C T A G A G T C C G T A A G T C C G T A C G A T C G T A A T G C A C G T A C G T
G T A C G C T A C A T G C G T A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A A G C T G T C A G T A C C A T G G A C T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:10
Score:0.59
Offset:1
Orientation:forward strand
Alignment:AGTARGCACATAC
-NWAACCACADNN
 C G T A C T A G A G C T G T C A C T A G C T A G A G T C C G T A A G T C C G T A C G A T C G T A A T G C
A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C