Information for 4-SGMSKCGKTGYGASCT (Motif 4)

A T G C A C T G G T A C A T C G A C T G A G T C A C T G C A T G A G C T T C A G A G C T A C T G C G T A A T G C A G T C A C G T
Reverse Opposite:
G T C A A C T G A T C G A C G T A G T C C T G A A G T C C T G A G T A C A G T C A C T G G T A C A T G C A C T G A G T C A T C G
p-value:1e-13
log p-value:-3.081e+01
Information Content per bp:1.820
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets56.2 +/- 19.1bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR4A2/MA0160.1/Jaspar

Match Rank:1
Score:0.60
Offset:9
Orientation:reverse strand
Alignment:SGMSKCGKTGYGASCT-
---------GTGACCTT
 A T G C A C T G G T A C A T C G A C T G A G T C A C T G C A T G A G C T T C A G A G C T A C T G C G T A A T G C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T

ESR2/MA0258.2/Jaspar

Match Rank:2
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:SGMSKCGKTGYGASCT
-AGGNCANNGTGACCT
 A T G C A C T G G T A C A T C G A C T G A G T C A C T G C A T G A G C T T C A G A G C T A C T G C G T A A T G C A G T C A C G T
A C G T C T G A C T A G C T A G C A G T A G T C C G T A A T C G A C T G T A C G G C A T T A C G T G C A G A T C G T A C G A C T

PB0120.1_Foxj1_2/Jaspar

Match Rank:3
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:SGMSKCGKTGYGASCT
-GTNTTGTTGTGANNT
 A T G C A C T G G T A C A T C G A C T G A G T C A C T G C A T G A G C T T C A G A G C T A C T G C G T A A T G C A G T C A C G T
A C G T C A T G A G C T T A C G G A C T G C A T A C T G A C G T G A C T C T A G A G C T A C T G T G C A A G T C T C G A C G A T

MGA/MA0801.1/Jaspar

Match Rank:4
Score:0.56
Offset:5
Orientation:forward strand
Alignment:SGMSKCGKTGYGASCT
-----AGGTGTGA---
 A T G C A C T G G T A C A T C G A C T G A G T C A C T G C A T G A G C T T C A G A G C T A C T G C G T A A T G C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A A C G T A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.55
Offset:9
Orientation:forward strand
Alignment:SGMSKCGKTGYGASCT---
---------NTGACCTTGA
 A T G C A C T G G T A C A T C G A C T G A G T C A C T G C A T G A G C T T C A G A G C T A C T G C G T A A T G C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A

TBX15/MA0803.1/Jaspar

Match Rank:6
Score:0.55
Offset:5
Orientation:forward strand
Alignment:SGMSKCGKTGYGASCT
-----AGGTGTGA---
 A T G C A C T G G T A C A T C G A C T G A G T C A C T G C A T G A G C T T C A G A G C T A C T G C G T A A T G C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T C T G A C T A G T C A G A C G T A T C G A G C T A C T G C T G A A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:7
Score:0.55
Offset:10
Orientation:reverse strand
Alignment:SGMSKCGKTGYGASCT--
----------TGACCTYA
 A T G C A C T G G T A C A T C G A C T G A G T C A C T G C A T G A G C T T C A G A G C T A C T G C G T A A T G C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

TBX1/MA0805.1/Jaspar

Match Rank:8
Score:0.55
Offset:5
Orientation:forward strand
Alignment:SGMSKCGKTGYGASCT
-----AGGTGTGA---
 A T G C A C T G G T A C A T C G A C T G A G T C A C T G C A T G A G C T T C A G A G C T A C T G C G T A A T G C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T C T G A T C A G A C T G A G C T A T C G G A C T A C T G T G C A A C G T A C G T A C G T

RORA/MA0071.1/Jaspar

Match Rank:9
Score:0.55
Offset:10
Orientation:reverse strand
Alignment:SGMSKCGKTGYGASCT----
----------TGACCTTGAT
 A T G C A C T G G T A C A T C G A C T G A G T C A C T G C A T G A G C T T C A G A G C T A C T G C G T A A T G C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:10
Score:0.54
Offset:10
Orientation:reverse strand
Alignment:SGMSKCGKTGYGASCT
----------TGACCT
 A T G C A C T G G T A C A T C G A C T G A G T C A C T G C A T G A G C T T C A G A G C T A C T G C G T A A T G C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T