Information for 20-TACTAACACT (Motif 35)

C G A T C G T A A G T C A C G T C T G A C G T A A G T C C G T A A G T C A C G T
Reverse Opposite:
C G T A A C T G A C G T A C T G A C G T A G C T T C G A A C T G C G A T C G T A
p-value:1e-5
log p-value:-1.360e+01
Information Content per bp:1.879
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif10.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets47.8 +/- 27.8bp
Average Position of motif in Background58.1 +/- 35.7bp
Strand Bias (log2 ratio + to - strand density)3.0
Multiplicity (# of sites on avg that occur together)1.80
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox5/MA0087.1/Jaspar

Match Rank:1
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:TACTAACACT
---NAACAAT
 C G A T C G T A A G T C A C G T C T G A C G T A A G T C C G T A A G T C A C G T
A C G T A C G T A C G T G C A T C G T A C T G A A G T C C G T A G T C A A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:2
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:TACTAACACT---
---MRSCACTYAA
 C G A T C G T A A G T C A C G T C T G A C G T A A G T C C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A

MF0011.1_HMG_class/Jaspar

Match Rank:3
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:TACTAACACT
----AACAAT
 C G A T C G T A A G T C A C G T C T G A C G T A A G T C C G T A A G T C A C G T
A C G T A C G T A C G T A C G T T C G A C G T A G A T C C T G A T G C A C G A T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:4
Score:0.60
Offset:4
Orientation:forward strand
Alignment:TACTAACACT----
----RSCACTYRAG
 C G A T C G T A A G T C A C G T C T G A C G T A A G T C C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G

TBX4/MA0806.1/Jaspar

Match Rank:5
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:TACTAACACT-
---TCACACCT
 C G A T C G T A A G T C A C G T C T G A C G T A A G T C C G T A A G T C A C G T A C G T
A C G T A C G T A C G T G A C T T G A C C T G A A G T C T C G A A T G C A G T C G A C T

TBX5/MA0807.1/Jaspar

Match Rank:6
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:TACTAACACT-
---TCACACCT
 C G A T C G T A A G T C A C G T C T G A C G T A A G T C C G T A A G T C A C G T A C G T
A C G T A C G T A C G T G A C T T G A C T C G A A G T C T G C A G T A C A G T C G A C T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.59
Offset:3
Orientation:forward strand
Alignment:TACTAACACT---
---AASCACTCAA
 C G A T C G T A A G T C A C G T C T G A C G T A A G T C C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A

PB0172.1_Sox1_2/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TACTAACACT-----
NNNTAACAATTATAN
 C G A T C G T A A G T C A C G T C T G A C G T A A G T C C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A T G C T C A G G T A C A C G T T G C A T G C A A T G C C T G A C T G A G A C T C G A T C T G A G A C T C T G A C A T G

NKX2-8/MA0673.1/Jaspar

Match Rank:9
Score:0.59
Offset:5
Orientation:forward strand
Alignment:TACTAACACT----
-----CCACTTGAA
 C G A T C G T A A G T C A C G T C T G A C G T A A G T C C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:10
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:TACTAACACT-
---TGACACCT
 C G A T C G T A A G T C A C G T C T G A C G T A A G T C C G T A A G T C A C G T A C G T
A C G T A C G T A C G T G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T