Information for 22-CACGCTGCTGTCC (Motif 32)

A T G C G T C A A T G C T C A G A G T C A C G T A C T G A T G C G A C T A C T G A G C T A T G C A G T C
Reverse Opposite:
A C T G A T C G C T G A A G T C C G T A A T C G A G T C C G T A A C T G A G T C A T C G A C G T A T C G
p-value:1e-6
log p-value:-1.391e+01
Information Content per bp:1.772
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.37%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.0 +/- 26.5bp
Average Position of motif in Background46.9 +/- 19.6bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)2.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CACGCTGCTGTCC
CCCCCTGCTGTG-
 A T G C G T C A A T G C T C A G A G T C A C G T A C T G A T G C G A C T A C T G A G C T A T G C A G T C
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:2
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CACGCTGCTGTCC
GGCCYCCTGCTGDGH
 A C G T A C G T A T G C G T C A A T G C T C A G A G T C A C G T A C T G A T G C G A C T A C T G A G C T A T G C A G T C
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

ZIC3/MA0697.1/Jaspar

Match Rank:3
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CACGCTGCTGTCC
GACCCCCCGCTGCGC
 A C G T A C G T A T G C G T C A A T G C T C A G A G T C A C G T A C T G A T G C G A C T A C T G A G C T A T G C A G T C
A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C

ZIC1/MA0696.1/Jaspar

Match Rank:4
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CACGCTGCTGTCC
GACCCCCCGCTGTG-
 A C G T A C G T A T G C G T C A A T G C T C A G A G T C A C G T A C T G A T G C G A C T A C T G A G C T A T G C A G T C
A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G A C G T

Myog/MA0500.1/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CACGCTGCTGTCC
-NNGCAGCTGTC-
 A T G C G T C A A T G C T C A G A G T C A C G T A C T G A T G C G A C T A C T G A G C T A T G C A G T C
A C G T A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CACGCTGCTGTCC
-CAGCAGCTGN--
 A T G C G T C A A T G C T C A G A G T C A C G T A C T G A T G C G A C T A C T G A G C T A T G C A G T C
A C G T T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T A C G T A C G T

Myod1/MA0499.1/Jaspar

Match Rank:7
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CACGCTGCTGTCC--
--TGCAGCTGTCCCT
 A T G C G T C A A T G C T C A G A G T C A C G T A C T G A T G C G A C T A C T G A G C T A T G C A G T C A C G T A C G T
A C G T A C G T G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CACGCTGCTGTCC-
AATCGCACTGCATTCCG
 A C G T A C G T A C G T A T G C G T C A A T G C T C A G A G T C A C G T A C T G A T G C G A C T A C T G A G C T A T G C A G T C A C G T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

ZIC4/MA0751.1/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CACGCTGCTGTCC
GACCCCCCGCTGTGC
 A C G T A C G T A T G C G T C A A T G C T C A G A G T C A C G T A C T G A T G C G A C T A C T G A G C T A T G C A G T C
A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CACGCTGCTGTCC
--ANCAGCTG---
 A T G C G T C A A T G C T C A G A G T C A C G T A C T G A T G C G A C T A C T G A G C T A T G C A G T C
A C G T A C G T C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G A C G T A C G T A C G T