Information for 13-GAAATCACAGGCC (Motif 23)

A C T G G T C A C T G A C G T A C G A T A G T C C T G A A G T C C G T A A C T G A C T G A G T C A G T C
Reverse Opposite:
A C T G C T A G A G T C A G T C A C G T A C T G A G C T A C T G C G T A C G A T A G C T C A G T A G T C
p-value:1e-8
log p-value:-1.933e+01
Information Content per bp:1.844
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.50%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.8 +/- 33.2bp
Average Position of motif in Background39.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.64
Offset:5
Orientation:reverse strand
Alignment:GAAATCACAGGCC
-----CACAGN--
 A C T G G T C A C T G A C G T A C G A T A G T C C T G A A G T C C G T A A C T G A C T G A G T C A G T C
A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:2
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GAAATCACAGGCC
-AAATCACAGCA-
 A C T G G T C A C T G A C G T A C G A T A G T C C T G A A G T C C G T A A C T G A C T G A G T C A G T C
A C G T T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A A C G T

Zfx/MA0146.2/Jaspar

Match Rank:3
Score:0.61
Offset:7
Orientation:reverse strand
Alignment:GAAATCACAGGCC--------
-------CAGGCCNNGGCCNN
 A C T G G T C A C T G A C G T A C G A T A G T C C T G A A G T C C G T A A C T G A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

RUNX1/MA0002.2/Jaspar

Match Rank:4
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GAAATCACAGGCC
-AAACCACAGAN-
 A C T G G T C A C T G A C G T A C G A T A G T C C T G A A G T C C G T A A C T G A C T G A G T C A G T C
A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GAAATCACAGGCC
NAAACCACAG---
 A C T G G T C A C T G A C G T A C G A T A G T C C T G A A G T C C G T A A C T G A C T G A G T C A G T C
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.60
Offset:8
Orientation:forward strand
Alignment:GAAATCACAGGCC---
--------AGGCCTNG
 A C T G G T C A C T G A C G T A C G A T A G T C C T G A A G T C C G T A A C T G A C T G A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G

Gfi1/MA0038.1/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GAAATCACAGGCC
CAAATCACTG---
 A C T G G T C A C T G A C G T A C G A T A G T C C T G A A G T C C G T A A C T G A C T G A G T C A G T C
A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GAAATCACAGGCC
-AAACCACAGC--
 A C T G G T C A C T G A C G T A C G A T A G T C C T G A A G T C C G T A A C T G A C T G A G T C A G T C
A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GAAATCACAGGCC-
AGAGTCCAAAGTCCA
 A C G T A C T G G T C A C T G A C G T A C G A T A G T C C T G A A G T C C G T A A C T G A C T G A G T C A G T C A C G T
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:10
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:GAAATCACAGGCC-
------CTAGGCCT
 A C T G G T C A C T G A C G T A C G A T A G T C C T G A A G T C C G T A A C T G A C T G A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T