Information for 13-GCCGCTATAG (Motif 20)

A C T G A G T C T A G C A C T G A G T C A C G T T C G A G A C T T C G A C T A G
Reverse Opposite:
A G T C A G C T C G T A A G C T C G T A A C T G A G T C A T C G A C T G A G T C
p-value:1e-9
log p-value:-2.101e+01
Information Content per bp:1.847
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.37%
Number of Background Sequences with motif44.7
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets52.0 +/- 27.2bp
Average Position of motif in Background48.8 +/- 31.1bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GCCGCTATAG
--NGCTN---
 A C T G A G T C T A G C A C T G A G T C A C G T T C G A G A C T T C G A C T A G
A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T

PB0128.1_Gcm1_2/Jaspar

Match Rank:2
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----GCCGCTATAG---
NTCNTCCCCTATNNGNN
 A C G T A C G T A C G T A C G T A C T G A G T C T A G C A C T G A G T C A C G T T C G A G A C T T C G A C T A G A C G T A C G T A C G T
T G A C C A G T A G T C T A G C A G C T A G T C T A G C G T A C G T A C A G C T C T G A A G C T C A T G A T G C T A C G G T A C G C T A

ZBED1/MA0749.1/Jaspar

Match Rank:3
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GCCGCTATAG
TATGTCGCGATAG
 A C G T A C G T A C G T A C T G A G T C T A G C A C T G A G T C A C G T T C G A G A C T T C G A C T A G
G A C T T G C A C G A T C T A G A G C T A G T C C T A G A G T C T C A G C T G A A G C T G C T A C A T G

PB0127.1_Gata6_2/Jaspar

Match Rank:4
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GCCGCTATAG-----
GCGGCGATATCGCAGCG
 A C G T A C G T A C T G A G T C T A G C A C T G A G T C A C G T T C G A G A C T T C G A C T A G A C G T A C G T A C G T A C G T A C G T
C A T G A T G C A T C G T C A G G T A C C A T G T G C A C A G T G T C A A C G T G T A C C A T G A T G C T G C A A T C G G A T C C A G T

PB0112.1_E2F2_2/Jaspar

Match Rank:5
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----GCCGCTATAG--
CCTTCGGCGCCAAAAGG
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C T A G C A C T G A G T C A C G T T C G A G A C T T C G A C T A G A C G T A C G T
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:6
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GCCGCTATAG
GGCVGTTR---
 A C G T A C T G A G T C T A G C A C T G A G T C A C G T T C G A G A C T T C G A C T A G
C T A G C T A G A G T C T C A G A C T G A C G T A C G T C T G A A C G T A C G T A C G T

YY1(Zf)/Promoter/Homer

Match Rank:7
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GCCGCTATAG--
GCCGCCATCTTG
 A C T G A G T C T A G C A C T G A G T C A C G T T C G A G A C T T C G A C T A G A C G T A C G T
C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GCCGCTATAG
CAGCAGCTGN--
 A C G T A C G T A C T G A G T C T A G C A C T G A G T C A C G T T C G A G A C T T C G A C T A G
T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T A C G T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:9
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----GCCGCTATAG--
NNNNAGCAGCTGCTGAN
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C T A G C A C T G A G T C A C G T T C G A G A C T T C G A C T A G A C G T A C G T
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

YY2/MA0748.1/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GCCGCTATAG
GTCCGCCATTA
 A C G T A C T G A G T C T A G C A C T G A G T C A C G T T C G A G A C T T C G A C T A G
C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A