Information for 10-RGCTCTGYGKTST (Motif 13)

C T A G A C T G A G T C A C G T A G T C A C G T A C T G A G C T A C T G A C G T A C G T A T C G A C G T
Reverse Opposite:
C G T A A T G C C G T A T G C A A G T C C T G A A G T C C G T A A C T G C G T A A C T G A G T C G A T C
p-value:1e-10
log p-value:-2.433e+01
Information Content per bp:1.873
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.87%
Number of Background Sequences with motif6.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets54.6 +/- 27.6bp
Average Position of motif in Background59.3 +/- 17.4bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1/MA0002.2/Jaspar

Match Rank:1
Score:0.65
Offset:2
Orientation:forward strand
Alignment:RGCTCTGYGKTST
--GTCTGTGGTTT
 C T A G A C T G A G T C A C G T A G T C A C G T A C T G A G C T A C T G A C G T A C G T A T C G A C G T
A C G T A C G T A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.63
Offset:3
Orientation:forward strand
Alignment:RGCTCTGYGKTST
---GCTGTGGTTT
 C T A G A C T G A G T C A C G T A G T C A C G T A C T G A G C T A C T G A C G T A C G T A T C G A C G T
A C G T A C G T A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:RGCTCTGYGKTST-
----CTGTGGTTTN
 C T A G A C T G A G T C A C G T A G T C A C G T A C T G A G C T A C T G A C G T A C G T A T C G A C G T A C G T
A C G T A C G T A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

RUNX3/MA0684.1/Jaspar

Match Rank:4
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:RGCTCTGYGKTST
---TTTGCGGTTT
 C T A G A C T G A G T C A C G T A G T C A C G T A C T G A G C T A C T G A C G T A C G T A T C G A C G T
A C G T A C G T A C G T C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:5
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:RGCTCTGYGKTST-
--NNHTGTGGTTWN
 C T A G A C T G A G T C A C G T A G T C A C G T A C T G A G C T A C T G A C G T A C G T A T C G A C G T A C G T
A C G T A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:6
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:RGCTCTGYGKTST
---NNTGTGGTTT
 C T A G A C T G A G T C A C G T A G T C A C G T A C T G A G C T A C T G A C G T A C G T A T C G A C G T
A C G T A C G T A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T

POL013.1_MED-1/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:forward strand
Alignment:RGCTCTGYGKTST
-GCTCCG------
 C T A G A C T G A G T C A C G T A G T C A C G T A C T G A G C T A C T G A C G T A C G T A T C G A C G T
A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:8
Score:0.56
Offset:3
Orientation:forward strand
Alignment:RGCTCTGYGKTST
---GCTGTG----
 C T A G A C T G A G T C A C G T A G T C A C G T A C T G A G C T A C T G A C G T A C G T A T C G A C G T
A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:9
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:RGCTCTGYGKTST
----TTGCGGTTT
 C T A G A C T G A G T C A C G T A G T C A C G T A C T G A G C T A C T G A C G T A C G T A T C G A C G T
A C G T A C G T A C G T A C G T A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T

POL010.1_DCE_S_III/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:RGCTCTGYGKTST
NGCTN--------
 C T A G A C T G A G T C A C G T A G T C A C G T A C T G A G C T A C T G A C G T A C G T A T C G A C G T
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T