Information for 9-AAGGAACAGA (Motif 8)

G T C A G T C A C T A G A C T G C G T A G C T A A G T C C G T A T A C G G T C A
Reverse Opposite:
C A G T A T G C A C G T C T A G C G A T C G A T G T A C A G T C C A G T C A G T
p-value:1e-11
log p-value:-2.695e+01
Information Content per bp:1.829
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif3.22%
Number of Background Sequences with motif252.9
Percentage of Background Sequences with motif0.55%
Average Position of motif in Targets42.4 +/- 22.8bp
Average Position of motif in Background49.7 +/- 33.9bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.79
Offset:-1
Orientation:forward strand
Alignment:-AAGGAACAGA
CCAGGAACAG-
 A C G T G T C A G T C A C T A G A C T G C G T A G C T A A G T C C G T A T A C G G T C A
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.77
Offset:1
Orientation:forward strand
Alignment:AAGGAACAGA-
-TGGAACAGMA
 G T C A G T C A C T A G A C T G C G T A G C T A A G T C C G T A T A C G G T C A A C G T
A C G T C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:3
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:AAGGAACAGA--
--GGAACAAAGR
 G T C A G T C A C T A G A C T G C G T A G C T A A G T C C G T A T A C G G T C A A C G T A C G T
A C G T A C G T T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G

PB0208.1_Zscan4_2/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AAGGAACAGA-----
CGAAGCACACAAAATA
 A C G T G T C A G T C A C T A G A C T G C G T A G C T A A G T C C G T A T A C G G T C A A C G T A C G T A C G T A C G T A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

NFATC2/MA0152.1/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AAGGAACAGA
-TGGAAAA--
 G T C A G T C A C T A G A C T G C G T A G C T A A G T C C G T A T A C G G T C A
A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T

SPIB/MA0081.1/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AAGGAACAGA
AGAGGAA----
 A C G T G T C A G T C A C T A G A C T G C G T A G C T A A G T C C G T A T A C G G T C A
C G T A T A C G T G C A C T A G C A T G C G T A C G T A A C G T A C G T A C G T A C G T

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.59
Offset:1
Orientation:forward strand
Alignment:AAGGAACAGA---
-CGGAAGTGAAAC
 G T C A G T C A C T A G A C T G C G T A G C T A A G T C C G T A T A C G G T C A A C G T A C G T A C G T
A C G T T G A C C T A G T C A G G T C A C G T A T C A G C G A T T C A G T C G A T G C A C T G A T A G C

PB0119.1_Foxa2_2/Jaspar

Match Rank:8
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--AAGGAACAGA---
AAAAATAACAAACGG
 A C G T A C G T G T C A G T C A C T A G A C T G C G T A G C T A A G T C C G T A T A C G G T C A A C G T A C G T A C G T
T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:9
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:AAGGAACAGA----
----AACAGATGGT
 G T C A G T C A C T A G A C T G C G T A G C T A A G T C C G T A T A C G G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:10
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--AAGGAACAGA
NDCAGGAARTNN
 A C G T A C G T G T C A G T C A C T A G A C T G C G T A G C T A A G T C C G T A T A C G G T C A
T G C A C T G A T A G C G T C A A C T G A C T G C G T A G C T A T C A G G A C T T C A G T A C G