Information for 6-CTGTCCCAAG (Motif 5)

T A G C G A C T A T C G A G C T A G T C G A T C G T A C G C T A C T G A C T A G
Reverse Opposite:
G A T C G A C T C G A T C A T G C T A G T C A G C T G A T A G C C T G A A T C G
p-value:1e-15
log p-value:-3.614e+01
Information Content per bp:1.652
Number of Target Sequences with motif146.0
Percentage of Target Sequences with motif18.09%
Number of Background Sequences with motif4052.4
Percentage of Background Sequences with motif8.89%
Average Position of motif in Targets45.1 +/- 27.4bp
Average Position of motif in Background49.2 +/- 32.6bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:CTGTCCCAAG
CTGTTCCTGG
 T A G C G A C T A T C G A G C T A G T C G A T C G T A C G C T A C T G A C T A G
T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:2
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CTGTCCCAAG
HTTTCCCASG
 T A G C G A C T A T C G A G C T A G T C G A T C G T A C G C T A C T G A C T A G
G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:3
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:CTGTCCCAAG--
--GTCACATGAY
 T A G C G A C T A T C G A G C T A G T C G A T C G T A C G C T A C T G A C T A G A C G T A C G T
A C G T A C G T T C A G G A C T G T A C G T C A A G T C T C G A G C A T A T C G T C G A A G T C

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CTGTCCCAAG
TKCTGTTCCA--
 A C G T A C G T T A G C G A C T A T C G A G C T A G T C G A T C G T A C G C T A C T G A C T A G
A C G T C A G T T A G C A G C T T A C G C G A T A C G T A G T C G T A C G T C A A C G T A C G T

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:5
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CTGTCCCAAG---
-NGTCCCNNGGGA
 T A G C G A C T A T C G A G C T A G T C G A T C G T A C G C T A C T G A C T A G A C G T A C G T A C G T
A C G T C T A G A T C G G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A

NFIA/MA0670.1/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CTGTCCCAAG-
-GGTGCCAAGT
 T A G C G A C T A T C G A G C T A G T C G A T C G T A C G C T A C T G A C T A G A C G T
A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T

MEIS3/MA0775.1/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CTGTCCCAAG
CCTGTCAA---
 A C G T T A G C G A C T A T C G A G C T A G T C G A T C G T A C G C T A C T G A C T A G
T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CTGTCCCAAG
GCTGTG-----
 A C G T T A G C G A C T A T C G A G C T A G T C G A T C G T A C G C T A C T G A C T A G
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:9
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CTGTCCCAAG
-TGACCT---
 T A G C G A C T A T C G A G C T A G T C G A T C G T A C G C T A C T G A C T A G
A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T

EBF1/MA0154.3/Jaspar

Match Rank:10
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CTGTCCCAAG-----
-ANTCCCTNGGGAAT
 T A G C G A C T A T C G A G C T A G T C G A T C G T A C G C T A C T G A C T A G A C G T A C G T A C G T A C G T A C G T
A C G T C T G A C A G T G A C T G T A C A G T C A G T C G C A T C G A T C T A G T C A G T A C G C T G A T G C A G A C T